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4P8R

Structure of a glycosomal glyceraldehyde 3-phosphate dehydrogenase from Trypanosoma brucei

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0004365molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
A0006006biological_processglucose metabolic process
A0006096biological_processglycolytic process
A0016491molecular_functionoxidoreductase activity
A0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
A0046872molecular_functionmetal ion binding
A0050661molecular_functionNADP binding
A0051287molecular_functionNAD binding
B0000166molecular_functionnucleotide binding
B0004365molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
B0006006biological_processglucose metabolic process
B0006096biological_processglycolytic process
B0016491molecular_functionoxidoreductase activity
B0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
B0046872molecular_functionmetal ion binding
B0050661molecular_functionNADP binding
B0051287molecular_functionNAD binding
C0000166molecular_functionnucleotide binding
C0004365molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
C0006006biological_processglucose metabolic process
C0006096biological_processglycolytic process
C0016491molecular_functionoxidoreductase activity
C0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
C0046872molecular_functionmetal ion binding
C0050661molecular_functionNADP binding
C0051287molecular_functionNAD binding
D0000166molecular_functionnucleotide binding
D0004365molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
D0006006biological_processglucose metabolic process
D0006096biological_processglycolytic process
D0016491molecular_functionoxidoreductase activity
D0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
D0046872molecular_functionmetal ion binding
D0050661molecular_functionNADP binding
D0051287molecular_functionNAD binding
Functional Information from PDB Data
site_idAC1
Number of Residues26
Detailsbinding site for residue NAD A 400
ChainResidue
AASN8
ATHR97
AGLY98
ALEU99
ATHR120
ACYS150
AALA181
AASN314
ATYR318
AHOH524
AHOH576
AGLY9
AHOH623
AHOH624
AHOH628
AHOH638
AHOH639
AHOH652
BPRO189
AGLY11
AARG12
AILE13
AASN33
AASP34
AARG78
ASER96

site_idAC2
Number of Residues4
Detailsbinding site for residue MG A 401
ChainResidue
AALA21
AARG24
AILE27
AHOH559

site_idAC3
Number of Residues25
Detailsbinding site for residue NAD B 400
ChainResidue
APRO189
BASN8
BGLY9
BGLY11
BARG12
BILE13
BASN33
BASP34
BARG78
BSER96
BTHR97
BGLY98
BLEU99
BTHR120
BCYS150
BALA181
BASN314
BTYR318
BHOH525
BHOH566
BHOH598
BHOH609
BHOH610
BHOH616
BHOH660

site_idAC4
Number of Residues3
Detailsbinding site for residue MG B 401
ChainResidue
BALA21
BARG24
BILE27

site_idAC5
Number of Residues28
Detailsbinding site for residue NAD C 400
ChainResidue
CASN8
CGLY9
CPHE10
CGLY11
CARG12
CILE13
CASN33
CASP34
CARG78
CSER96
CTHR97
CGLY98
CLEU99
CTHR120
CCYS150
CALA181
CASN314
CTYR318
CHOH538
CHOH569
CHOH641
CHOH642
CHOH651
CHOH657
CHOH674
CHOH680
CHOH681
DPRO189

site_idAC6
Number of Residues27
Detailsbinding site for residue NAD D 400
ChainResidue
DTHR120
DCYS150
DALA181
DASN314
DHOH515
DHOH522
DHOH546
DHOH559
DHOH597
DHOH619
DHOH625
DHOH626
DHOH658
DHOH666
CPRO189
DASN8
DGLY9
DGLY11
DARG12
DILE13
DASN33
DASP34
DARG78
DSER96
DTHR97
DGLY98
DLEU99

site_idAC7
Number of Residues3
Detailsbinding site for residue MG D 401
ChainResidue
DALA21
DARG24
DILE27

Functional Information from PROSITE/UniProt
site_idPS00071
Number of Residues8
DetailsGAPDH Glyceraldehyde 3-phosphate dehydrogenase active site. ASCTTNcL
ChainResidueDetails
AALA148-LEU155

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PDB entries from 2024-10-09

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