4OXB
Structure of ECP with sulphate anions at 1.50 Angstroms
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0001530 | molecular_function | lipopolysaccharide binding |
A | 0002227 | biological_process | innate immune response in mucosa |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0004519 | molecular_function | endonuclease activity |
A | 0004540 | molecular_function | RNA nuclease activity |
A | 0005576 | cellular_component | extracellular region |
A | 0005615 | cellular_component | extracellular space |
A | 0006401 | biological_process | RNA catabolic process |
A | 0006935 | biological_process | chemotaxis |
A | 0019731 | biological_process | antibacterial humoral response |
A | 0035578 | cellular_component | azurophil granule lumen |
A | 0042742 | biological_process | defense response to bacterium |
A | 0043152 | biological_process | induction of bacterial agglutination |
A | 0045087 | biological_process | innate immune response |
A | 0050829 | biological_process | defense response to Gram-negative bacterium |
A | 0050830 | biological_process | defense response to Gram-positive bacterium |
A | 0061844 | biological_process | antimicrobial humoral immune response mediated by antimicrobial peptide |
B | 0001530 | molecular_function | lipopolysaccharide binding |
B | 0002227 | biological_process | innate immune response in mucosa |
B | 0003676 | molecular_function | nucleic acid binding |
B | 0004519 | molecular_function | endonuclease activity |
B | 0004540 | molecular_function | RNA nuclease activity |
B | 0005576 | cellular_component | extracellular region |
B | 0005615 | cellular_component | extracellular space |
B | 0006401 | biological_process | RNA catabolic process |
B | 0006935 | biological_process | chemotaxis |
B | 0019731 | biological_process | antibacterial humoral response |
B | 0035578 | cellular_component | azurophil granule lumen |
B | 0042742 | biological_process | defense response to bacterium |
B | 0043152 | biological_process | induction of bacterial agglutination |
B | 0045087 | biological_process | innate immune response |
B | 0050829 | biological_process | defense response to Gram-negative bacterium |
B | 0050830 | biological_process | defense response to Gram-positive bacterium |
B | 0061844 | biological_process | antimicrobial humoral immune response mediated by antimicrobial peptide |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 7 |
Details | binding site for residue SO4 A 301 |
Chain | Residue |
A | ARG34 |
A | ASN39 |
A | HOH403 |
A | HOH447 |
A | HOH465 |
A | HOH509 |
B | ARG104 |
site_id | AC2 |
Number of Residues | 6 |
Details | binding site for residue SO4 A 302 |
Chain | Residue |
A | ARG101 |
A | HOH435 |
A | HOH523 |
A | HOH579 |
A | ARG1 |
A | ARG7 |
site_id | AC3 |
Number of Residues | 5 |
Details | binding site for residue SO4 A 303 |
Chain | Residue |
A | ARG77 |
A | ARG104 |
A | HOH402 |
A | HOH412 |
B | ARG36 |
site_id | AC4 |
Number of Residues | 11 |
Details | binding site for residue SO4 A 304 |
Chain | Residue |
A | ARG121 |
A | ARG121 |
A | HOH404 |
A | HOH407 |
A | HOH415 |
A | HOH415 |
A | HOH416 |
A | HOH416 |
B | VAL52 |
B | PRO123 |
B | VAL124 |
site_id | AC5 |
Number of Residues | 6 |
Details | binding site for residue SO4 A 305 |
Chain | Residue |
A | ARG28 |
A | ASN32 |
A | ARG61 |
A | ARG66 |
A | HOH401 |
A | HOH410 |
site_id | AC6 |
Number of Residues | 8 |
Details | binding site for residue SO4 A 306 |
Chain | Residue |
A | ARG22 |
A | HOH405 |
A | HOH419 |
A | HOH452 |
B | ARG28 |
B | ASN32 |
B | ARG61 |
B | ARG66 |
site_id | AC7 |
Number of Residues | 9 |
Details | binding site for residue SO4 B 301 |
Chain | Residue |
A | ARG104 |
B | ARG34 |
B | LYS38 |
B | ASN39 |
B | HOH408 |
B | HOH409 |
B | HOH418 |
B | HOH422 |
B | HOH529 |
site_id | AC8 |
Number of Residues | 4 |
Details | binding site for residue SO4 B 302 |
Chain | Residue |
B | ARG1 |
B | ARG7 |
B | ARG101 |
B | HOH439 |
site_id | AC9 |
Number of Residues | 6 |
Details | binding site for residue SO4 B 303 |
Chain | Residue |
A | TRP35 |
A | ARG36 |
A | HOH461 |
B | ARG77 |
B | ARG104 |
B | HOH403 |
site_id | BC1 |
Number of Residues | 7 |
Details | binding site for residue SO4 B 304 |
Chain | Residue |
A | ARG75 |
A | HOH451 |
B | ASN87 |
B | PRO88 |
B | GLY89 |
B | HOH406 |
B | HOH428 |
site_id | BC2 |
Number of Residues | 6 |
Details | binding site for residue SO4 B 305 |
Chain | Residue |
A | GLN58 |
A | SER59 |
A | HOH432 |
B | ARG97 |
B | HOH433 |
B | HOH493 |
site_id | BC3 |
Number of Residues | 8 |
Details | binding site for residue SO4 B 306 |
Chain | Residue |
A | ASN57 |
A | GLN58 |
A | ARG75 |
B | ASN87 |
B | GLN91 |
B | ARG97 |
B | HOH420 |
B | HOH457 |
site_id | BC4 |
Number of Residues | 6 |
Details | binding site for residue SO4 B 307 |
Chain | Residue |
B | ASN57 |
B | GLN58 |
B | ARG73 |
B | ARG75 |
B | ARG75 |
B | HOH496 |
Functional Information from PROSITE/UniProt
site_id | PS00127 |
Number of Residues | 7 |
Details | RNASE_PANCREATIC Pancreatic ribonuclease family signature. CKnqNTF |
Chain | Residue | Details |
A | CYS37-PHE43 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: Proton acceptor |
Chain | Residue | Details |
A | HIS15 | |
B | HIS15 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | ACT_SITE: Proton donor |
Chain | Residue | Details |
A | HIS128 | |
B | HIS128 |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | BINDING: |
Chain | Residue | Details |
A | LYS38 | |
B | LYS38 |
site_id | SWS_FT_FI4 |
Number of Residues | 2 |
Details | SITE: May be involved in LPS-binding |
Chain | Residue | Details |
A | TYR33 | |
B | TYR33 |
site_id | SWS_FT_FI5 |
Number of Residues | 2 |
Details | SITE: May be involved in LPS- and LTA-binding |
Chain | Residue | Details |
A | TRP35 | |
B | TRP35 |
site_id | SWS_FT_FI6 |
Number of Residues | 2 |
Details | MOD_RES: 3'-nitrotyrosine => ECO:0000269|PubMed:18694936 |
Chain | Residue | Details |
A | TYR33 | |
B | TYR33 |
site_id | SWS_FT_FI7 |
Number of Residues | 6 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255 |
Chain | Residue | Details |
A | ASN57 | |
A | ASN65 | |
A | ASN92 | |
B | ASN57 | |
B | ASN65 | |
B | ASN92 |