4OQ9
Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005198 | molecular_function | structural molecule activity |
A | 0019028 | cellular_component | viral capsid |
B | 0005198 | molecular_function | structural molecule activity |
B | 0019028 | cellular_component | viral capsid |
C | 0005198 | molecular_function | structural molecule activity |
C | 0019028 | cellular_component | viral capsid |
D | 0005198 | molecular_function | structural molecule activity |
D | 0019028 | cellular_component | viral capsid |
E | 0005198 | molecular_function | structural molecule activity |
E | 0019028 | cellular_component | viral capsid |
F | 0005198 | molecular_function | structural molecule activity |
F | 0019028 | cellular_component | viral capsid |
G | 0005198 | molecular_function | structural molecule activity |
G | 0019028 | cellular_component | viral capsid |
H | 0005198 | molecular_function | structural molecule activity |
H | 0019028 | cellular_component | viral capsid |
I | 0005198 | molecular_function | structural molecule activity |
I | 0019028 | cellular_component | viral capsid |
J | 0005198 | molecular_function | structural molecule activity |
J | 0019028 | cellular_component | viral capsid |
K | 0005198 | molecular_function | structural molecule activity |
K | 0019028 | cellular_component | viral capsid |
L | 0005198 | molecular_function | structural molecule activity |
L | 0019028 | cellular_component | viral capsid |
M | 0005198 | molecular_function | structural molecule activity |
M | 0019028 | cellular_component | viral capsid |
N | 0005198 | molecular_function | structural molecule activity |
N | 0019028 | cellular_component | viral capsid |
O | 0005198 | molecular_function | structural molecule activity |
O | 0019028 | cellular_component | viral capsid |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE PO4 A 201 |
Chain | Residue |
A | ASN115 |
E | ASN117 |
E | SO4201 |
E | MG203 |
A | ASN117 |
B | ASN115 |
B | ASN117 |
C | ASN115 |
C | ASN117 |
D | ASN115 |
D | ASN117 |
E | ASN115 |
site_id | AC2 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 A 202 |
Chain | Residue |
A | PHE93 |
A | ARG95 |
A | HOH519 |
A | HOH560 |
A | HOH636 |
A | HOH700 |
A | HOH709 |
A | HOH743 |
site_id | AC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE NA A 203 |
Chain | Residue |
A | ASP68 |
O | ASP68 |
O | NA202 |
O | HOH337 |
O | HOH434 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 B 201 |
Chain | Residue |
B | ARG95 |
B | HOH325 |
B | HOH367 |
B | HOH413 |
site_id | AC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE NA B 202 |
Chain | Residue |
B | ASP68 |
B | ASP68 |
B | HOH516 |
B | HOH516 |
site_id | AC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE NA B 203 |
Chain | Residue |
B | ARG66 |
B | ASP68 |
B | HOH326 |
B | HOH426 |
site_id | AC7 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 C 201 |
Chain | Residue |
C | ARG95 |
C | HOH322 |
C | HOH365 |
site_id | AC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE NA C 202 |
Chain | Residue |
C | ASP68 |
C | HOH498 |
N | ASP68 |
N | HOH326 |
site_id | AC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 D 201 |
Chain | Residue |
D | PHE93 |
D | ARG95 |
D | HOH325 |
D | HOH367 |
D | HOH442 |
D | HOH496 |
site_id | BC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA D 202 |
Chain | Residue |
D | ASP68 |
H | ASP68 |
H | SER69 |
H | NA203 |
H | HOH325 |
H | HOH427 |
site_id | BC2 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE SO4 E 201 |
Chain | Residue |
A | ASN117 |
A | PO4201 |
A | HOH564 |
B | ASN117 |
B | HOH371 |
C | ASN117 |
C | HOH369 |
D | ASN117 |
D | HOH371 |
E | ASN117 |
E | HOH306 |
E | HOH307 |
E | HOH310 |
E | HOH315 |
site_id | BC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 E 202 |
Chain | Residue |
E | ARG95 |
E | HOH333 |
E | HOH375 |
E | HOH500 |
E | HOH510 |
E | HOH532 |
site_id | BC4 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG E 203 |
Chain | Residue |
A | PO4201 |
site_id | BC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA E 204 |
Chain | Residue |
E | ASP68 |
F | ASP68 |
F | SER69 |
F | NA203 |
F | HOH325 |
F | HOH423 |
site_id | BC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE NA E 205 |
Chain | Residue |
E | ASP68 |
E | HOH496 |
F | ASP68 |
site_id | BC7 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 F 201 |
Chain | Residue |
F | PHE93 |
F | ARG95 |
F | HOH324 |
F | HOH365 |
F | HOH496 |
site_id | BC8 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG F 202 |
Chain | Residue |
H | PO4201 |
site_id | BC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA F 203 |
Chain | Residue |
E | ASP68 |
E | SER69 |
E | NA204 |
E | HOH334 |
E | HOH432 |
F | ASP68 |
site_id | CC1 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE SO4 G 201 |
Chain | Residue |
F | HOH369 |
G | ASN117 |
G | HOH307 |
G | HOH308 |
G | HOH310 |
G | HOH378 |
G | HOH575 |
H | ASN117 |
H | PO4201 |
H | HOH371 |
I | ASN117 |
I | HOH370 |
J | ASN117 |
J | HOH377 |
F | ASN117 |
site_id | CC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 G 202 |
Chain | Residue |
G | PHE93 |
G | ARG95 |
G | HOH330 |
G | HOH374 |
site_id | CC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE NA G 203 |
Chain | Residue |
G | ARG66 |
G | ASP68 |
G | ASP68 |
G | HOH331 |
G | HOH433 |
site_id | CC4 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE PO4 H 201 |
Chain | Residue |
F | ASN115 |
F | ASN117 |
F | MG202 |
G | ASN115 |
G | ASN117 |
G | SO4201 |
H | ASN115 |
H | ASN117 |
I | ASN115 |
I | ASN117 |
J | ASN115 |
J | ASN117 |
site_id | CC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 H 202 |
Chain | Residue |
H | PHE93 |
H | ARG95 |
H | HOH324 |
H | HOH367 |
H | HOH566 |
H | HOH567 |
site_id | CC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA H 203 |
Chain | Residue |
D | ASP68 |
D | SER69 |
D | NA202 |
D | HOH326 |
D | HOH511 |
H | ASP68 |
site_id | CC7 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 I 201 |
Chain | Residue |
I | PHE93 |
I | ARG95 |
I | HOH324 |
I | HOH441 |
I | HOH491 |
I | HOH493 |
I | HOH519 |
I | HOH520 |
site_id | CC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE NA I 202 |
Chain | Residue |
I | ASP68 |
I | HOH422 |
M | ASP68 |
M | HOH327 |
site_id | CC9 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 J 201 |
Chain | Residue |
J | ARG95 |
J | HOH331 |
J | HOH373 |
J | HOH450 |
J | HOH539 |
site_id | DC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA J 202 |
Chain | Residue |
J | ARG66 |
J | ASP68 |
J | HOH571 |
K | ASP68 |
K | NA203 |
K | HOH328 |
site_id | DC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 K 201 |
Chain | Residue |
K | ARG95 |
K | HOH327 |
K | HOH445 |
site_id | DC3 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG K 202 |
Chain | Residue |
N | PO4201 |
site_id | DC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA K 203 |
Chain | Residue |
J | ASP68 |
J | NA202 |
J | HOH332 |
K | ASP68 |
K | HOH307 |
K | HOH328 |
site_id | DC5 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 L 201 |
Chain | Residue |
L | PHE93 |
L | ARG95 |
L | HOH5027 |
L | HOH5069 |
L | HOH5148 |
L | HOH5203 |
L | HOH5264 |
site_id | DC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE NA L 202 |
Chain | Residue |
L | ASP68 |
L | ASP68 |
L | HOH5028 |
site_id | DC7 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE SO4 M 201 |
Chain | Residue |
K | ASN117 |
K | HOH374 |
L | ASN117 |
L | HOH5007 |
L | HOH5073 |
M | ASN117 |
M | HOH301 |
M | HOH306 |
M | HOH373 |
N | ASN117 |
N | PO4201 |
N | HOH371 |
O | ASN117 |
O | HOH379 |
site_id | DC8 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 M 202 |
Chain | Residue |
M | PHE93 |
M | ARG95 |
M | HOH326 |
M | HOH369 |
M | HOH502 |
M | HOH531 |
M | HOH562 |
M | HOH586 |
site_id | DC9 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE NA M 203 |
Chain | Residue |
I | ASP68 |
I | HOH325 |
M | ASP68 |
M | HOH327 |
M | HOH427 |
site_id | EC1 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE PO4 N 201 |
Chain | Residue |
K | ASN115 |
K | ASN117 |
K | MG202 |
L | ASN115 |
L | ASN117 |
M | ASN115 |
M | ASN117 |
M | SO4201 |
N | ASN115 |
N | ASN117 |
O | ASN115 |
O | ASN117 |
site_id | EC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 N 202 |
Chain | Residue |
N | PHE93 |
N | ARG95 |
N | HOH325 |
N | HOH443 |
N | HOH514 |
site_id | EC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE NA N 203 |
Chain | Residue |
C | ASP68 |
C | HOH323 |
N | ASP68 |
N | HOH424 |
site_id | EC4 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 O 201 |
Chain | Residue |
O | PHE93 |
O | ARG95 |
O | HOH317 |
O | HOH336 |
O | HOH375 |
O | HOH456 |
O | HOH524 |
O | HOH572 |
site_id | EC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE NA O 202 |
Chain | Residue |
A | ASP68 |
A | NA203 |
A | HOH520 |
A | HOH725 |
O | ASP68 |