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4ONC

Crystal Structure of Mycobacterium Tuberculosis Decaprenyl Diphosphate Synthase in Complex with BPH-640

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0004659molecular_functionprenyltransferase activity
A0005829cellular_componentcytosol
A0005886cellular_componentplasma membrane
A0008834molecular_functionditrans,polycis-undecaprenyl-diphosphate synthase [(2E,6E)-farnesyl-diphosphate specific] activity
A0016020cellular_componentmembrane
A0016094biological_processpolyprenol biosynthetic process
A0016740molecular_functiontransferase activity
A0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
A0030145molecular_functionmanganese ion binding
A0033850molecular_functionZ-farnesyl diphosphate synthase activity
A0045547molecular_functionditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity
A0046872molecular_functionmetal ion binding
A0052923molecular_functionall-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity
B0000287molecular_functionmagnesium ion binding
B0004659molecular_functionprenyltransferase activity
B0005829cellular_componentcytosol
B0005886cellular_componentplasma membrane
B0008834molecular_functionditrans,polycis-undecaprenyl-diphosphate synthase [(2E,6E)-farnesyl-diphosphate specific] activity
B0016020cellular_componentmembrane
B0016094biological_processpolyprenol biosynthetic process
B0016740molecular_functiontransferase activity
B0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
B0030145molecular_functionmanganese ion binding
B0033850molecular_functionZ-farnesyl diphosphate synthase activity
B0045547molecular_functionditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity
B0046872molecular_functionmetal ion binding
B0052923molecular_functionall-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity
Functional Information from PDB Data
site_idAC1
Number of Residues14
DetailsBINDING SITE FOR RESIDUE 40B A 500
ChainResidue
AGLY77
BASN172
BGLU173
BVAL176
BARG292
BPHE293
AGLY79
AARG80
ATHR83
AARG89
AARG127
AHOH679
AHOH809
BARG144

site_idAC2
Number of Residues11
DetailsBINDING SITE FOR RESIDUE 40B B 500
ChainResidue
BGLY77
BASN78
BGLY79
BARG80
BARG89
BASN124
BARG127
BHOH722
BHOH781
BHOH804
BHOH810

Functional Information from PROSITE/UniProt
site_idPS01066
Number of Residues18
DetailsUPP_SYNTHASE Undecaprenyl pyrophosphate synthase family signature. DLFLRTSGeqRsSnFMLW
ChainResidueDetails
AASP240-TRP257

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: ACT_SITE => ECO:0000250
ChainResidueDetails
AASP76
BASP76

site_idSWS_FT_FI2
Number of Residues2
DetailsACT_SITE: Proton acceptor
ChainResidueDetails
AASN124
BASN124

site_idSWS_FT_FI3
Number of Residues10
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP76
BGLU263
ATRP81
AHIS93
ATRP125
AGLU263
BASP76
BTRP81
BHIS93
BTRP125

site_idSWS_FT_FI4
Number of Residues14
DetailsBINDING:
ChainResidueDetails
AARG89
BARG127
BARG168
BARG244
BARG250
BARG292
ASER121
AARG127
AARG168
AARG244
AARG250
AARG292
BARG89
BSER121

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PDB entries from 2025-06-18

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