4ODC
Crystal structure of Trematomus bernacchii hemoglobin in a partially cyanided state
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004601 | molecular_function | peroxidase activity |
A | 0005344 | molecular_function | oxygen carrier activity |
A | 0005506 | molecular_function | iron ion binding |
A | 0005833 | cellular_component | hemoglobin complex |
A | 0015671 | biological_process | oxygen transport |
A | 0019825 | molecular_function | oxygen binding |
A | 0020037 | molecular_function | heme binding |
A | 0031720 | molecular_function | haptoglobin binding |
A | 0031838 | cellular_component | haptoglobin-hemoglobin complex |
A | 0042744 | biological_process | hydrogen peroxide catabolic process |
A | 0043177 | molecular_function | organic acid binding |
A | 0046872 | molecular_function | metal ion binding |
A | 0072562 | cellular_component | blood microparticle |
A | 0098869 | biological_process | cellular oxidant detoxification |
B | 0004601 | molecular_function | peroxidase activity |
B | 0005344 | molecular_function | oxygen carrier activity |
B | 0005833 | cellular_component | hemoglobin complex |
B | 0015671 | biological_process | oxygen transport |
B | 0019825 | molecular_function | oxygen binding |
B | 0020037 | molecular_function | heme binding |
B | 0031720 | molecular_function | haptoglobin binding |
B | 0031838 | cellular_component | haptoglobin-hemoglobin complex |
B | 0042744 | biological_process | hydrogen peroxide catabolic process |
B | 0043177 | molecular_function | organic acid binding |
B | 0046872 | molecular_function | metal ion binding |
B | 0072562 | cellular_component | blood microparticle |
B | 0098869 | biological_process | cellular oxidant detoxification |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CYN A 202 |
Chain | Residue |
A | LEU30 |
A | HIS60 |
A | VAL64 |
A | HOH201 |
A | HEM203 |
site_id | AC2 |
Number of Residues | 20 |
Details | BINDING SITE FOR RESIDUE HEM A 203 |
Chain | Residue |
A | LYS63 |
A | GLN88 |
A | HIS89 |
A | LEU93 |
A | VAL95 |
A | ASN99 |
A | PHE100 |
A | LEU103 |
A | ASN104 |
A | LEU138 |
A | HOH201 |
A | CYN202 |
A | HOH1057 |
A | HOH1074 |
A | HOH1147 |
B | ASN47 |
A | TYR43 |
A | HIS46 |
A | TRP47 |
A | HIS60 |
site_id | AC3 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE CYN B 201 |
Chain | Residue |
B | HIS63 |
B | VAL67 |
B | HEM202 |
site_id | AC4 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE HEM B 202 |
Chain | Residue |
B | HIS41 |
B | PHE42 |
B | HIS63 |
B | LYS66 |
B | HIS92 |
B | LEU96 |
B | ASN102 |
B | PHE103 |
B | LEU106 |
B | LEU141 |
B | CYN201 |
B | HOH477 |
site_id | AC5 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL B 203 |
Chain | Residue |
B | VAL1 |
B | MET78 |
B | ASP79 |
B | ASN80 |
B | ILE81 |
B | ALA82 |
B | HIS146 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 1 |
Details | BINDING: distal binding residue => ECO:0007744|PDB:1S5X, ECO:0007744|PDB:1S5Y, ECO:0007744|PDB:2PEG, ECO:0007744|PDB:4IRO |
Chain | Residue | Details |
B | HIS63 |
site_id | SWS_FT_FI2 |
Number of Residues | 1 |
Details | BINDING: proximal binding residue => ECO:0000269|PubMed:7623382, ECO:0007744|PDB:1HBH, ECO:0007744|PDB:1PBX, ECO:0007744|PDB:1S5X, ECO:0007744|PDB:1S5Y, ECO:0007744|PDB:2H8D, ECO:0007744|PDB:2H8F, ECO:0007744|PDB:2PEG, ECO:0007744|PDB:3GKV, ECO:0007744|PDB:3GQG, ECO:0007744|PDB:4G51, ECO:0007744|PDB:4IRO, ECO:0007744|PDB:4ODC |
Chain | Residue | Details |
B | HIS92 |
site_id | SWS_FT_FI3 |
Number of Residues | 1 |
Details | MOD_RES: N-acetylserine => ECO:0000269|PubMed:7623382 |
Chain | Residue | Details |
A | SER2 |