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4NT2

Crystal structure of Arabidopsis ACD11 (accelerated-cell-death 11) complexed with lyso-sphingomyelin (d18:1) at 2.4 Angstrom resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006869biological_processlipid transport
A0008219biological_processcell death
A0008289molecular_functionlipid binding
A0009751biological_processresponse to salicylic acid
A0015914biological_processphospholipid transport
A0016020cellular_componentmembrane
A0035621biological_processER to Golgi ceramide transport
A0042742biological_processdefense response to bacterium
A0120009biological_processintermembrane lipid transfer
A0120013molecular_functionlipid transfer activity
A0140338molecular_functionsphingomyelin transfer activity
A1902387molecular_functionceramide 1-phosphate binding
A1902388molecular_functionceramide 1-phosphate transfer activity
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SPU A 301
ChainResidue
AASP60
AHIS143
AGLY144
AILE147
ALEU153
ASPU302
ASO4307
AHOH426

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SPU A 302
ChainResidue
AILE147
ALYS149
ATYR156
ASPU301
ASO4304
ASO4307
ATRP145

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 303
ChainResidue
ALYS64
AARG99
AARG103
AHOH475

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 304
ChainResidue
AARG148
ALYS149
ASPU302

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 305
ChainResidue
ASER181
AASN184

site_idAC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE SO4 A 306
ChainResidue
AARG11

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 307
ChainResidue
ATRP145
AARG148
ASPU301
ASPU302

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 308
ChainResidue
AILE52
AALA53
APHE54
ALYS55
APHE56
AVAL151

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 309
ChainResidue
AVAL79
AASP83
ALEU196
ALYS200

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues5
DetailsBINDING: BINDING => ECO:0000269|PubMed:24412362
ChainResidueDetails
AASP60
ALYS64
AARG99
AARG103
AHIS143

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PDB entries from 2024-04-24

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