4MVW
Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor 1-{3-[(3,5-dichlorobenzyl)amino]propyl}-3-thiophen-3-ylurea (Chem 1433)
Replaces: 3U1ZFunctional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0004812 | molecular_function | aminoacyl-tRNA ligase activity |
| A | 0004825 | molecular_function | methionine-tRNA ligase activity |
| A | 0005524 | molecular_function | ATP binding |
| A | 0006418 | biological_process | tRNA aminoacylation for protein translation |
| A | 0006431 | biological_process | methionyl-tRNA aminoacylation |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0004812 | molecular_function | aminoacyl-tRNA ligase activity |
| B | 0004825 | molecular_function | methionine-tRNA ligase activity |
| B | 0005524 | molecular_function | ATP binding |
| B | 0006418 | biological_process | tRNA aminoacylation for protein translation |
| B | 0006431 | biological_process | methionyl-tRNA aminoacylation |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE GOL A 801 |
| Chain | Residue |
| A | ARG271 |
| A | ARG274 |
| A | SER714 |
| site_id | AC2 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL A 802 |
| Chain | Residue |
| A | ILE661 |
| A | GLN662 |
| A | ILE265 |
| A | HIS545 |
| A | SER585 |
| A | GLY586 |
| A | PHE587 |
| A | ASP660 |
| site_id | AC3 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE GOL A 803 |
| Chain | Residue |
| A | ARG583 |
| A | ARG601 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL A 804 |
| Chain | Residue |
| A | ASP726 |
| A | GLY729 |
| A | VAL730 |
| A | PRO731 |
| A | GLU732 |
| A | ARG735 |
| A | HOH1011 |
| site_id | AC5 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE DMS A 805 |
| Chain | Residue |
| A | GLU392 |
| A | LYS517 |
| A | ASP518 |
| A | ILE519 |
| A | LEU520 |
| A | LYS521 |
| A | DMS806 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE DMS A 806 |
| Chain | Residue |
| A | LYS521 |
| A | DMS805 |
| A | DMS807 |
| site_id | AC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE DMS A 807 |
| Chain | Residue |
| A | LEU444 |
| A | DMS806 |
| site_id | AC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MET A 808 |
| Chain | Residue |
| A | ILE248 |
| A | TYR250 |
| A | ASP287 |
| A | TRP474 |
| A | LYS550 |
| A | HOH999 |
| site_id | AC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE DMS B 801 |
| Chain | Residue |
| B | GLU320 |
| B | TYR324 |
| B | SER325 |
| B | ILE326 |
| site_id | BC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE GOL B 802 |
| Chain | Residue |
| B | GLU343 |
| B | LEU482 |
| B | ARG486 |
| B | HOH984 |
| site_id | BC2 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE GOL B 803 |
| Chain | Residue |
| B | ARG583 |
| B | ARG601 |
| site_id | BC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL B 804 |
| Chain | Residue |
| B | HIS289 |
| B | LYS338 |
| B | ASN458 |
| B | TRP459 |
| B | ALA460 |
| site_id | BC4 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE DMS B 805 |
| Chain | Residue |
| B | 43E807 |
| site_id | BC5 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 B 806 |
| Chain | Residue |
| B | ARG271 |
| B | VAL275 |
| B | SER714 |
| B | PRO718 |
| B | HOH903 |
| site_id | BC6 |
| Number of Residues | 15 |
| Details | BINDING SITE FOR RESIDUE 43E B 807 |
| Chain | Residue |
| B | ILE248 |
| B | TYR250 |
| B | ASP287 |
| B | HIS289 |
| B | VAL471 |
| B | VAL473 |
| B | TRP474 |
| B | ASP476 |
| B | ALA477 |
| B | LEU478 |
| B | TYR481 |
| B | HIS523 |
| B | DMS805 |
| B | HOH910 |
| B | HOH1016 |
