Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4ML2

Crystal structure of wild-type YafQ

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003723molecular_functionRNA binding
A0004519molecular_functionendonuclease activity
A0004521molecular_functionRNA endonuclease activity
A0005515molecular_functionprotein binding
A0006402biological_processmRNA catabolic process
A0006415biological_processtranslational termination
A0016892molecular_functionRNA endonuclease activity, producing 3'-phosphomonoesters
A0040008biological_processregulation of growth
A0043022molecular_functionribosome binding
A0044010biological_processsingle-species biofilm formation
A0045892biological_processnegative regulation of DNA-templated transcription
A0046677biological_processresponse to antibiotic
A0110001cellular_componenttoxin-antitoxin complex
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A 101
ChainResidue
AHIS23
AHIS50
AASP61
AHIS63
AHIS87
AHOH320
AHOH337
AHOH393

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 A 102
ChainResidue
AHIS63
APRO66
AHOH213
AHOH215
AHOH224
AHOH298
AHOH346
AHOH353
ALYS48

site_idAC3
Number of Residues10
DetailsBINDING SITE FOR RESIDUE SO4 A 103
ChainResidue
AARG22
AGLY54
ATHR86
AALA89
AHOH203
AHOH251
AHOH263
AHOH323
AHOH373
AHOH386

site_idAC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE SO4 A 104
ChainResidue
APRO44
AALA45
APRO51
AARG60
AHOH214
AHOH231
AHOH294
AHOH315
AHOH351
AHOH369

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 105
ChainResidue
ALYS73
AARG80
AHOH279
AHOH307
AHOH379
AHOH399

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton donor => ECO:0000305
ChainResidueDetails
AHIS87

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon