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4ME6

Crystal structure of D-alanine-D-alanine ligase A from Xanthomonas oryzae pathovar oryzae with ADP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0008360biological_processregulation of cell shape
A0008716molecular_functionD-alanine-D-alanine ligase activity
A0009252biological_processpeptidoglycan biosynthetic process
A0016874molecular_functionligase activity
A0046872molecular_functionmetal ion binding
A0071555biological_processcell wall organization
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 401
ChainResidue
AASP302
AASN314
AGLU315
AADP402
AHOH552
AHOH666

site_idAC2
Number of Residues12
DetailsBINDING SITE FOR RESIDUE ADP A 402
ChainResidue
AALA222
AALA223
AVAL224
AGLU228
APHE304
AGLU315
AMG401
AHOH575
AHOH666
APHE183
ALYS185
AGLU221

Functional Information from PROSITE/UniProt
site_idPS00843
Number of Residues12
DetailsDALA_DALA_LIGASE_1 D-alanine--D-alanine ligase signature 1. HGtlGEDGsLQG
ChainResidueDetails
AHIS107-GLY118

site_idPS00844
Number of Residues29
DetailsDALA_DALA_LIGASE_2 D-alanine--D-alanine ligase signature 2. LgcaGmARVDVFlcadgriv....InEVNTlPG
ChainResidueDetails
ALEU293-GLY321

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PDB entries from 2024-10-09

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