4MDT
Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0008759 | molecular_function | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
A | 0009245 | biological_process | lipid A biosynthetic process |
B | 0008759 | molecular_function | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
B | 0009245 | biological_process | lipid A biosynthetic process |
C | 0008759 | molecular_function | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
C | 0009245 | biological_process | lipid A biosynthetic process |
D | 0008759 | molecular_function | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
D | 0009245 | biological_process | lipid A biosynthetic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN A 401 |
Chain | Residue |
A | HIS79 |
A | HIS238 |
A | ASP242 |
A | PO4403 |
site_id | AC2 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE 24G A 402 |
Chain | Residue |
A | PHE192 |
A | GLY210 |
A | SER211 |
A | VAL217 |
A | LYS239 |
A | LYS262 |
A | GLY264 |
A | HIS265 |
A | PO4403 |
A | HOH506 |
A | HOH561 |
B | ARG204 |
A | LEU62 |
A | LYS143 |
A | ILE159 |
A | ASP160 |
A | PHE161 |
site_id | AC3 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE PO4 A 403 |
Chain | Residue |
A | LEU62 |
A | GLU78 |
A | HIS79 |
A | THR191 |
A | HIS238 |
A | ASP242 |
A | HIS265 |
A | ZN401 |
A | 24G402 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN B 401 |
Chain | Residue |
B | HIS79 |
B | HIS238 |
B | ASP242 |
B | PO4403 |
site_id | AC5 |
Number of Residues | 23 |
Details | BINDING SITE FOR RESIDUE 24G B 402 |
Chain | Residue |
A | ARG204 |
B | THR60 |
B | LEU62 |
B | LYS143 |
B | ILE159 |
B | ASP160 |
B | PHE161 |
B | PHE192 |
B | PHE194 |
B | CYS207 |
B | SER211 |
B | VAL217 |
B | LYS239 |
B | LYS262 |
B | GLY264 |
B | HIS265 |
B | PO4403 |
B | HOH502 |
B | HOH512 |
B | HOH521 |
B | HOH528 |
B | HOH534 |
B | HOH536 |
site_id | AC6 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE PO4 B 403 |
Chain | Residue |
B | LEU62 |
B | THR76 |
B | GLU78 |
B | HIS79 |
B | THR191 |
B | HIS238 |
B | ASP242 |
B | HIS265 |
B | ZN401 |
B | 24G402 |
site_id | AC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN C 401 |
Chain | Residue |
C | HIS79 |
C | HIS238 |
C | ASP242 |
C | PO4403 |
site_id | AC8 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE 24G C 402 |
Chain | Residue |
C | THR60 |
C | LEU62 |
C | ILE159 |
C | PHE161 |
C | PHE192 |
C | ILE198 |
C | CYS207 |
C | GLY210 |
C | SER211 |
C | ALA215 |
C | VAL217 |
C | LYS239 |
C | LYS262 |
C | GLY264 |
C | HIS265 |
C | PO4403 |
D | ARG204 |
site_id | AC9 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE PO4 C 403 |
Chain | Residue |
C | GLU78 |
C | HIS79 |
C | THR191 |
C | HIS238 |
C | ASP242 |
C | HIS265 |
C | ZN401 |
C | 24G402 |
site_id | BC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN D 401 |
Chain | Residue |
D | PO4403 |
D | HIS79 |
D | HIS238 |
D | ASP242 |
site_id | BC2 |
Number of Residues | 20 |
Details | BINDING SITE FOR RESIDUE 24G D 402 |
Chain | Residue |
C | ARG204 |
D | LEU18 |
D | LEU62 |
D | LYS143 |
D | ILE159 |
D | ASP160 |
D | PHE161 |
D | THR191 |
D | PHE192 |
D | PHE194 |
D | GLY210 |
D | SER211 |
D | ALA215 |
D | VAL217 |
D | LYS239 |
D | LYS262 |
D | GLY264 |
D | HIS265 |
D | PO4403 |
D | HOH501 |
site_id | BC3 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE PO4 D 403 |
Chain | Residue |
D | THR76 |
D | GLU78 |
D | HIS79 |
D | THR191 |
D | HIS238 |
D | ASP242 |
D | HIS265 |
D | ZN401 |
D | 24G402 |