4LNO

B. subtilis glutamine synthetase structures reveal large active site conformational changes and basis for isoenzyme specific regulation: form two of GS-1

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000166	molecular_function	nucleotide binding
A	0000287	molecular_function	magnesium ion binding
A	0003824	molecular_function	catalytic activity
A	0004356	molecular_function	glutamine synthetase activity
A	0005515	molecular_function	protein binding
A	0005524	molecular_function	ATP binding
A	0005737	cellular_component	cytoplasm
A	0006542	biological_process	glutamine biosynthetic process
A	0016595	molecular_function	glutamate binding
A	0016874	molecular_function	ligase activity
A	0043562	biological_process	cellular response to nitrogen levels
A	0045892	biological_process	negative regulation of DNA-templated transcription
A	0046872	molecular_function	metal ion binding
A	0070406	molecular_function	glutamine binding
A	0090295	biological_process	nitrogen catabolite repression of transcription
A	0140297	molecular_function	DNA-binding transcription factor binding
A	0140416	molecular_function	transcription regulator inhibitor activity
B	0000166	molecular_function	nucleotide binding
B	0000287	molecular_function	magnesium ion binding
B	0003824	molecular_function	catalytic activity
B	0004356	molecular_function	glutamine synthetase activity
B	0005515	molecular_function	protein binding
B	0005524	molecular_function	ATP binding
B	0005737	cellular_component	cytoplasm
B	0006542	biological_process	glutamine biosynthetic process
B	0016595	molecular_function	glutamate binding
B	0016874	molecular_function	ligase activity
B	0043562	biological_process	cellular response to nitrogen levels
B	0045892	biological_process	negative regulation of DNA-templated transcription
B	0046872	molecular_function	metal ion binding
B	0070406	molecular_function	glutamine binding
B	0090295	biological_process	nitrogen catabolite repression of transcription
B	0140297	molecular_function	DNA-binding transcription factor binding
B	0140416	molecular_function	transcription regulator inhibitor activity
C	0000166	molecular_function	nucleotide binding
C	0000287	molecular_function	magnesium ion binding
C	0003824	molecular_function	catalytic activity
C	0004356	molecular_function	glutamine synthetase activity
C	0005515	molecular_function	protein binding
C	0005524	molecular_function	ATP binding
C	0005737	cellular_component	cytoplasm
C	0006542	biological_process	glutamine biosynthetic process
C	0016595	molecular_function	glutamate binding
C	0016874	molecular_function	ligase activity
C	0043562	biological_process	cellular response to nitrogen levels
C	0045892	biological_process	negative regulation of DNA-templated transcription
C	0046872	molecular_function	metal ion binding
C	0070406	molecular_function	glutamine binding
C	0090295	biological_process	nitrogen catabolite repression of transcription
C	0140297	molecular_function	DNA-binding transcription factor binding
C	0140416	molecular_function	transcription regulator inhibitor activity
D	0000166	molecular_function	nucleotide binding
D	0000287	molecular_function	magnesium ion binding
D	0003824	molecular_function	catalytic activity
D	0004356	molecular_function	glutamine synthetase activity
D	0005515	molecular_function	protein binding
D	0005524	molecular_function	ATP binding
D	0005737	cellular_component	cytoplasm
D	0006542	biological_process	glutamine biosynthetic process
D	0016595	molecular_function	glutamate binding
D	0016874	molecular_function	ligase activity
D	0043562	biological_process	cellular response to nitrogen levels
D	0045892	biological_process	negative regulation of DNA-templated transcription
D	0046872	molecular_function	metal ion binding
D	0070406	molecular_function	glutamine binding
D	0090295	biological_process	nitrogen catabolite repression of transcription
D	0140297	molecular_function	DNA-binding transcription factor binding
D	0140416	molecular_function	transcription regulator inhibitor activity
E	0000166	molecular_function	nucleotide binding
E	0000287	molecular_function	magnesium ion binding
E	0003824	molecular_function	catalytic activity
E	0004356	molecular_function	glutamine synthetase activity
E	0005515	molecular_function	protein binding
E	0005524	molecular_function	ATP binding
E	0005737	cellular_component	cytoplasm
E	0006542	biological_process	glutamine biosynthetic process
E	0016595	molecular_function	glutamate binding
E	0016874	molecular_function	ligase activity
E	0043562	biological_process	cellular response to nitrogen levels
E	0045892	biological_process	negative regulation of DNA-templated transcription
E	0046872	molecular_function	metal ion binding
E	0070406	molecular_function	glutamine binding
E	0090295	biological_process	nitrogen catabolite repression of transcription
E	0140297	molecular_function	DNA-binding transcription factor binding
E	0140416	molecular_function	transcription regulator inhibitor activity
F	0000166	molecular_function	nucleotide binding
F	0000287	molecular_function	magnesium ion binding
F	0003824	molecular_function	catalytic activity
F	0004356	molecular_function	glutamine synthetase activity
F	0005515	molecular_function	protein binding
F	0005524	molecular_function	ATP binding
F	0005737	cellular_component	cytoplasm
F	0006542	biological_process	glutamine biosynthetic process
F	0016595	molecular_function	glutamate binding
F	0016874	molecular_function	ligase activity
F	0043562	biological_process	cellular response to nitrogen levels
F	0045892	biological_process	negative regulation of DNA-templated transcription
F	0046872	molecular_function	metal ion binding
F	0070406	molecular_function	glutamine binding
F	0090295	biological_process	nitrogen catabolite repression of transcription
F	0140297	molecular_function	DNA-binding transcription factor binding
F	0140416	molecular_function	transcription regulator inhibitor activity

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	BINDING SITE FOR RESIDUE MG A 501

Chain	Residue
A	GLU134
A	GLU189
A	GLU196
A	GLN503
A	HOH608

---

site_id	AC2
Number of Residues	5
Details	BINDING SITE FOR RESIDUE MG A 502

Chain	Residue
B	GLU65
A	GLU132
A	HIS245
A	GLU333
A	HOH608

---

site_id	AC3
Number of Residues	12
Details	BINDING SITE FOR RESIDUE GLN A 503

Chain	Residue
A	GLU134
A	TYR156
A	GLU189
A	GLN194
A	GLY241
A	HIS245
A	ARG298
A	GLU304
A	MG501
A	HOH608
A	HOH609
A	HOH663

---

site_id	AC4
Number of Residues	5
Details	BINDING SITE FOR RESIDUE MG B 501

Chain	Residue
B	GLU134
B	GLU189
B	GLU196
B	GLN503
B	HOH686

---

site_id	AC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG B 502

Chain	Residue
B	GLU132
B	HIS245
B	GLU333

---

site_id	AC6
Number of Residues	12
Details	BINDING SITE FOR RESIDUE GLN B 503

Chain	Residue
B	GLU134
B	TYR156
B	GLU189
B	GLY241
B	HIS245
B	ARG298
B	GLU304
B	ALA305
B	ARG335
B	MG501
B	HOH604
C	HOH607

---

site_id	AC7
Number of Residues	10
Details	BINDING SITE FOR RESIDUE GLN C 501

Chain	Residue
C	GLU134
C	TYR156
C	GLU189
C	GLY241
C	HIS245
C	ARG298
C	GLU304
C	MG503
C	HOH603
C	HOH628

---

site_id	AC8
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG C 502

Chain	Residue
C	GLU132
C	HIS245
C	GLU333
D	GLU65

---

site_id	AC9
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG C 503

Chain	Residue
C	GLU134
C	GLU189
C	GLU196
C	GLN501

---

site_id	BC1
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG D 501

Chain	Residue
D	GLU134
D	GLU189
D	GLU196
D	GLN503

---

site_id	BC2
Number of Residues	5
Details	BINDING SITE FOR RESIDUE MG D 502

Chain	Residue
D	GLU132
D	HIS245
D	GLU333
D	HOH704
E	GLU65

---

site_id	BC3
Number of Residues	9
Details	BINDING SITE FOR RESIDUE GLN D 503

Chain	Residue
D	GLU134
D	TYR156
D	GLU189
D	GLY241
D	HIS245
D	ARG298
D	GLU304
D	MG501
D	HOH611

---

site_id	BC4
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG E 501

Chain	Residue
E	GLU132
E	HIS245
E	GLU333
E	HOH627
F	GLU65
F	HOH602

---

site_id	BC5
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG E 502

Chain	Residue
E	GLU134
E	GLU189
E	GLU196
E	GLN503

---

site_id	BC6
Number of Residues	10
Details	BINDING SITE FOR RESIDUE GLN E 503

Chain	Residue
E	GLU134
E	TYR156
E	GLU189
E	ASN240
E	GLY241
E	HIS245
E	ARG298
E	GLU304
E	MG502
E	HOH636

---

site_id	BC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG F 501

Chain	Residue
F	HIS245
F	GLU333
F	GLU132

---

site_id	BC8
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG F 502

Chain	Residue
F	GLU134
F	GLU189
F	GLU196
F	GLN503

---

site_id	BC9
Number of Residues	9
Details	BINDING SITE FOR RESIDUE GLN F 503

Chain	Residue
F	GLU134
F	GLU189
F	GLY241
F	HIS245
F	ARG298
F	GLU304
F	MG502
F	HOH612
F	HOH659

---

Functional Information from PROSITE/UniProt

site_id	PS00180
Number of Residues	19
Details	GLNA_1 Glutamine synthetase signature 1. FDGSSiegfvrieESDmyL

Chain	Residue	Details
A	PHE52-LEU70

---

site_id	PS00181
Number of Residues	16
Details	GLNA_ATP Glutamine synthetase putative ATP-binding region signature. KPLfgv..NGSGmHcnlS

Chain	Residue	Details
A	LYS234-SER249

---

site_id	PS00182
Number of Residues	13
Details	GLNA_ADENYLATION Glutamine synthetase class-I adenylation site. KLeapapIDRNIY

Chain	Residue	Details
A	LYS361-TYR373

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	510
Details	Domain: {"description":"GS beta-grasp","evidences":[{"source":"PROSITE-ProRule","id":"PRU01330","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	2016
Details	Domain: {"description":"GS catalytic","evidences":[{"source":"PROSITE-ProRule","id":"PRU01331","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	12
Details	Binding site: {"evidences":[{"source":"PubMed","id":"24158439","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25691471","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4LNF","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4LNI","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4LNK","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4LNN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4S0R","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	18
Details	Binding site: {"evidences":[{"source":"PubMed","id":"24158439","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25691471","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4LNF","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4LNI","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4LNK","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4S0R","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	24
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"P9WN39","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	6
Details	Binding site: {"evidences":[{"source":"PubMed","id":"24158439","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25691471","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4LNF","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4LNK","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4LNN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4S0R","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI7
Number of Residues	6
Details	Binding site: {"evidences":[{"source":"PubMed","id":"24158439","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25691471","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4LNF","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4LNK","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4S0R","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI8
Number of Residues	6
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"P77961","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI9
Number of Residues	18
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"P0A1P6","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI10
Number of Residues	6
Details	Site: {"description":"Important for inhibition by glutamine","evidences":[{"source":"PubMed","id":"24158439","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---