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4LJQ

Crystal structure of the catalytic core of E3 ligase HOIP

Functional Information from GO Data
ChainGOidnamespacecontents
A0004842molecular_functionubiquitin-protein transferase activity
A0008270molecular_functionzinc ion binding
A0071797cellular_componentLUBAC complex
B0004842molecular_functionubiquitin-protein transferase activity
B0008270molecular_functionzinc ion binding
B0071797cellular_componentLUBAC complex
C0004842molecular_functionubiquitin-protein transferase activity
C0008270molecular_functionzinc ion binding
C0071797cellular_componentLUBAC complex
D0004842molecular_functionubiquitin-protein transferase activity
D0008270molecular_functionzinc ion binding
D0071797cellular_componentLUBAC complex
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 1101
ChainResidue
BCYS871
BCYS874
BCYS890
BCYS893

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 1102
ChainResidue
BCYS898
BCYS901
BHIS926
BCYS930

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 1103
ChainResidue
BCYS916
BHIS923
BHIS925
BCYS911

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 1104
ChainResidue
BCYS969
BCYS986
BCYS998
BHIS1001

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 1105
ChainResidue
BHIS887
BHIS889
CHIS887
CHIS889

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1101
ChainResidue
ACYS871
ACYS874
ACYS890
ACYS893

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1102
ChainResidue
ACYS898
ACYS901
AHIS926
ACYS930

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1103
ChainResidue
ACYS911
ACYS916
AHIS923
AHIS925

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1104
ChainResidue
ACYS969
ACYS986
ACYS998
AHIS1001

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1105
ChainResidue
AHIS887
AHIS889
DHIS887
DHIS889

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN C 1101
ChainResidue
CCYS871
CCYS874
CCYS890
CCYS893

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN C 1102
ChainResidue
CCYS898
CCYS901
CHIS926
CCYS930

site_idBC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN C 1103
ChainResidue
CCYS911
CCYS916
CHIS923
CHIS925

site_idBC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN C 1104
ChainResidue
CCYS969
CCYS986
CCYS998
CHIS1001

site_idBC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN D 1101
ChainResidue
DCYS871
DCYS874
DCYS890
DCYS893

site_idBC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN D 1102
ChainResidue
DCYS898
DCYS901
DHIS926
DCYS930

site_idBC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN D 1103
ChainResidue
DCYS911
DCYS916
DHIS923
DHIS925

site_idBC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN D 1104
ChainResidue
DCYS969
DVAL971
DCYS986
DCYS998
DHIS1001

Functional Information from PROSITE/UniProt
site_idPS00518
Number of Residues10
DetailsZF_RING_1 Zinc finger RING-type signature. CrHqFCsgCY
ChainResidueDetails
BCYS893-TYR902

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues120
DetailsZN_FING: RING-type 2; atypical => ECO:0000255|PROSITE-ProRule:PRU01221
ChainResidueDetails
BCYS871-CYS901
ACYS871-CYS901
CCYS871-CYS901
DCYS871-CYS901

site_idSWS_FT_FI2
Number of Residues4
DetailsACT_SITE: ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU01221
ChainResidueDetails
BCYS885
ACYS885
CCYS885
DCYS885

site_idSWS_FT_FI3
Number of Residues32
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU01221
ChainResidueDetails
BCYS871
ACYS874
ACYS890
ACYS893
ACYS898
ACYS901
ACYS916
AHIS925
CCYS871
CCYS874
CCYS890
BCYS874
CCYS893
CCYS898
CCYS901
CCYS916
CHIS925
DCYS871
DCYS874
DCYS890
DCYS893
DCYS898
BCYS890
DCYS901
DCYS916
DHIS925
BCYS893
BCYS898
BCYS901
BCYS916
BHIS925
ACYS871

site_idSWS_FT_FI4
Number of Residues8
DetailsCROSSLNK: (Microbial infection) Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:27572974
ChainResidueDetails
BLYS875
ALYS875
CLYS875
DLYS875

226707

PDB entries from 2024-10-30

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