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4LH7

Crystal structure of a LigA inhibitor

Functional Information from GO Data
ChainGOidnamespacecontents
A0003911molecular_functionDNA ligase (NAD+) activity
Functional Information from PDB Data
site_idAC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE 1X8 A 401
ChainResidue
ATYR87
ALEU89
AGLU118
ALEU119
ALYS120
AILE121
AGLU175
ATYR227
ALYS291

site_idAC2
Number of Residues13
DetailsBINDING SITE FOR RESIDUE NMN A 402
ChainResidue
ATYR25
ASER26
ATYR29
ATYR30
AVAL37
AASP39
ATYR42
AASP43
AARG158
AHOH554
AHOH561
AHOH581
AHOH634

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 403
ChainResidue
AALA218
AARG220
AHOH535
AHOH562
AHOH596
AHOH627

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA A 404
ChainResidue
AGLU276
ASER279
AHOH543
AHOH587

Functional Information from PROSITE/UniProt
site_idPS01055
Number of Residues30
DetailsDNA_LIGASE_N1 NAD-dependent DNA ligase signature 1. KIDGLAislrYenGvFvrgaTRGDGtvGEN
ChainResidueDetails
ALYS120-ASN149

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"description":"N6-AMP-lysine intermediate","evidences":[{"source":"HAMAP-Rule","id":"MF_01588","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues12
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01588","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"15296738","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

246031

PDB entries from 2025-12-10

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