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4LFY

Crystal structure of a dihydroorotase from Burkholderia cenocepacia J2315

Functional Information from GO Data
ChainGOidnamespacecontents
A0004151molecular_functiondihydroorotase activity
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0006221biological_processpyrimidine nucleotide biosynthetic process
A0008270molecular_functionzinc ion binding
A0009220biological_processpyrimidine ribonucleotide biosynthetic process
A0016787molecular_functionhydrolase activity
A0016812molecular_functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
A0019856biological_processpyrimidine nucleobase biosynthetic process
A0044205biological_process'de novo' UMP biosynthetic process
A0046872molecular_functionmetal ion binding
B0004151molecular_functiondihydroorotase activity
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
B0006221biological_processpyrimidine nucleotide biosynthetic process
B0008270molecular_functionzinc ion binding
B0009220biological_processpyrimidine ribonucleotide biosynthetic process
B0016787molecular_functionhydrolase activity
B0016812molecular_functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
B0019856biological_processpyrimidine nucleobase biosynthetic process
B0044205biological_process'de novo' UMP biosynthetic process
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN A 401
ChainResidue
AHIS31
AHIS33
AKCX117
AASP268
AZN402
AHOH656

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 402
ChainResidue
AZN401
AHOH656
AKCX117
AHIS154
AHIS192

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 403
ChainResidue
AARG108
AGLY148
ALYS187
APHE320
ATYR321
AHOH701
AHOH788

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A 404
ChainResidue
AARG225
AARG245
BARG225
BARG245

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CA A 405
ChainResidue
AARG245
BHOH689

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN B 401
ChainResidue
BHIS31
BHIS33
BKCX117
BASP268
BZN402
BHOH636

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN B 402
ChainResidue
BKCX117
BHIS154
BHIS192
BZN401
BHOH636

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO B 403
ChainResidue
BARG108
BGLY148
BLYS187
BPHE320
BTYR321
BGLY322
BHOH754

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA B 404
ChainResidue
AARG225
AARG245
BARG225
BARG245

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA B 405
ChainResidue
AHOH573
BARG245
BTHR247
BHOH687

Functional Information from PROSITE/UniProt
site_idPS00482
Number of Residues9
DetailsDIHYDROOROTASE_1 Dihydroorotase signature 1. DWHLHLRdG
ChainResidueDetails
AASP29-GLY37

site_idPS00483
Number of Residues12
DetailsDIHYDROOROTASE_2 Dihydroorotase signature 2. GTDsAPHardaK
ChainResidueDetails
AGLY266-LYS277

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PDB entries from 2024-10-30

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