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4LFV

Crystal structure of human FPPS in complex with YS0470 and two molecules of inorganic phosphate

Functional Information from GO Data
ChainGOidnamespacecontents
F0004659molecular_functionprenyltransferase activity
F0008299biological_processisoprenoid biosynthetic process
F0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
Functional Information from PDB Data
site_idAC1
Number of Residues28
DetailsBINDING SITE FOR RESIDUE YS4 F 401
ChainResidue
FPHE99
FGLN171
FLYS200
FTHR201
FASP243
FLYS257
FPO4403
FMG404
FMG405
FMG406
FHOH501
FASP103
FHOH505
FHOH506
FHOH510
FHOH512
FHOH516
FHOH518
FHOH524
FHOH526
FHOH542
FMET106
FASP107
FARG112
FASN130
FASN133
FTHR167
FGLU168

site_idAC2
Number of Residues10
DetailsBINDING SITE FOR RESIDUE PO4 F 402
ChainResidue
FGLY56
FLYS57
FARG60
FGLN96
FARG113
FPO4403
FHOH507
FHOH513
FHOH527
FHOH585

site_idAC3
Number of Residues11
DetailsBINDING SITE FOR RESIDUE PO4 F 403
ChainResidue
FARG60
FGLN96
FLEU100
FARG112
FASP243
FLYS257
FYS4401
FPO4402
FHOH518
FHOH527
FHOH624

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG F 404
ChainResidue
FASP103
FASP107
FYS4401
FMG405
FHOH505
FHOH525
FHOH542

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG F 405
ChainResidue
FASP103
FASP107
FYS4401
FMG404
FHOH506
FHOH512

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG F 406
ChainResidue
FASP243
FYS4401
FHOH501
FHOH510
FHOH516

site_idAC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL F 407
ChainResidue
FASP251

Functional Information from PROSITE/UniProt
site_idPS00444
Number of Residues13
DetailsPOLYPRENYL_SYNTHASE_2 Polyprenyl synthases signature 2. MGefFQIqDDYlD
ChainResidueDetails
FMET235-ASP247

site_idPS00723
Number of Residues15
DetailsPOLYPRENYL_SYNTHASE_1 Polyprenyl synthases signature 1. LVaDDim..DssltRRG
ChainResidueDetails
FLEU100-GLY114

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:16684881, ECO:0007744|PDB:1ZW5
ChainResidueDetails
FGLY123
FLEU126
FGLN162
FILE169
FLEU173
FPRO179

site_idSWS_FT_FI2
Number of Residues5
DetailsBINDING:
ChainResidueDetails
FALA178
FLYS266
FCYS267
FGLU306
FSER323

site_idSWS_FT_FI3
Number of Residues1
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
FTYR332

site_idSWS_FT_FI4
Number of Residues2
DetailsSITE: Important for determining product chain length => ECO:0000250
ChainResidueDetails
FSER164
FTYR165

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: N6-acetyllysine; alternate => ECO:0007744|PubMed:19608861
ChainResidueDetails
FGLY123

site_idSWS_FT_FI6
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
FLYS353

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PDB entries from 2024-07-24

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