4LD0
T. thermophilus RuvC in complex with Holliday junction substrate
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000287 | molecular_function | magnesium ion binding |
| A | 0003676 | molecular_function | nucleic acid binding |
| A | 0003677 | molecular_function | DNA binding |
| A | 0004518 | molecular_function | nuclease activity |
| A | 0004519 | molecular_function | endonuclease activity |
| A | 0004520 | molecular_function | DNA endonuclease activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006281 | biological_process | DNA repair |
| A | 0006310 | biological_process | DNA recombination |
| A | 0006974 | biological_process | DNA damage response |
| A | 0008821 | molecular_function | crossover junction DNA endonuclease activity |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0048476 | cellular_component | Holliday junction resolvase complex |
| B | 0000287 | molecular_function | magnesium ion binding |
| B | 0003676 | molecular_function | nucleic acid binding |
| B | 0003677 | molecular_function | DNA binding |
| B | 0004518 | molecular_function | nuclease activity |
| B | 0004519 | molecular_function | endonuclease activity |
| B | 0004520 | molecular_function | DNA endonuclease activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006281 | biological_process | DNA repair |
| B | 0006310 | biological_process | DNA recombination |
| B | 0006974 | biological_process | DNA damage response |
| B | 0008821 | molecular_function | crossover junction DNA endonuclease activity |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0048476 | cellular_component | Holliday junction resolvase complex |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 4 |
| Details | Motif: {"description":"Wedge","evidences":[{"source":"PubMed","id":"31506434","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 6 |
| Details | Active site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00034","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"23118486","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"23980027","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"31506434","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | Active site: {"evidences":[{"source":"PubMed","id":"23118486","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00034","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"23118486","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4EP4","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"23980027","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"31506434","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4LD0","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"6S16","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00034","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"23980027","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"31506434","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"23118486","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"4LD0","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"23980027","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"31506434","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4LD0","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"31506434","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"23980027","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"6S16","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"23980027","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4LD0","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
