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4LCZ

Crystal structure of a multilayer-packed major light-harvesting complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0009765biological_processphotosynthesis, light harvesting
A0016020cellular_componentmembrane
B0009765biological_processphotosynthesis, light harvesting
B0016020cellular_componentmembrane
C0009765biological_processphotosynthesis, light harvesting
C0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues14
DetailsBINDING SITE FOR RESIDUE LUT A 301
ChainResidue
AMET73
APRO205
ACHL312
ACLA314
ACLA316
ACLA317
APHE161
AASP162
APRO163
ALEU164
AASN183
ASER190
APHE194
AGLN197

site_idAC2
Number of Residues16
DetailsBINDING SITE FOR RESIDUE LUT A 302
ChainResidue
ATRP46
AASP47
ATHR48
AALA49
ALEU51
AGLY75
ATRP97
AALA100
AMET188
ACLA306
ACLA307
ACLA308
ACHL310
ACHL311
AHOH418
BCLA307

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NEX A 303
ChainResidue
ATYR112
AVAL138
ATYR141
ACLA308
ACHL310
ACHL312

site_idAC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE LHG A 304
ChainResidue
ATYR44
ALYS182
ALEU186
APHE189
ACHL305
ACLA306
ACLA315
ACLA317
BCLA307

site_idAC5
Number of Residues13
DetailsBINDING SITE FOR RESIDUE CHL A 305
ChainResidue
AVAL22
ALYS23
ATYR24
ALEU25
AGLY26
APRO27
APHE28
ATYR44
ATRP46
ALHG304
ACLA306
BCHL311
BCHL313

site_idAC6
Number of Residues20
DetailsBINDING SITE FOR RESIDUE CLA A 306
ChainResidue
ALEU36
AGLY42
AASP43
ATYR44
AGLY45
ATRP46
AASP47
ASER52
AASN61
AARG62
AGLU65
AHIS68
AARG185
AMET188
APHE189
ALUT302
ALHG304
ACHL305
ACLA307
BCHL313

site_idAC7
Number of Residues11
DetailsBINDING SITE FOR RESIDUE CLA A 307
ChainResidue
ALEU64
AHIS68
APHE195
ALUT302
ACLA306
ACHL311
ACHL313
AHOH427
BCLA307
CLUT302
CCLA307

site_idAC8
Number of Residues13
DetailsBINDING SITE FOR RESIDUE CLA A 308
ChainResidue
ANEX303
ACHL310
AHOH433
ALEU74
AGLY75
AGLY78
APHE92
AGLU94
AGLN103
ALEU110
ATYR112
ALEU113
ALUT302

site_idAC9
Number of Residues12
DetailsBINDING SITE FOR RESIDUE CHL A 309
ChainResidue
APRO116
ASER117
ALEU118
AVAL119
AHIS120
AALA121
AGLN122
ASER123
AALA126
ACYS130
ACHL310
BGLU107

site_idBC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE CHL A 310
ChainResidue
ATRP71
AGLY101
ALEU110
AALA121
ACYS130
AGLN131
ALEU134
ALUT302
ANEX303
ACLA308
ACHL309
ACHL311
ACHL313
AHOH412
AHOH421
AHOH422

site_idBC2
Number of Residues16
DetailsBINDING SITE FOR RESIDUE CHL A 311
ChainResidue
APHE98
ALYS99
AGLY101
ASER102
AILE104
APHE105
AGLN131
APHE195
ALUT302
ACLA307
ACHL310
ACHL313
AHOH412
AHOH436
AHOH458
CCHL305

site_idBC3
Number of Residues20
DetailsBINDING SITE FOR RESIDUE CHL A 312
ChainResidue
AILE67
AARG70
ATRP71
AVAL138
ATYR141
AARG142
AGLY146
APRO147
ALEU148
AGLY149
APRO154
APRO157
ASER160
APHE161
APRO163
ALUT301
ANEX303
ACLA314
AHOH425
AHOH426

site_idBC4
Number of Residues18
DetailsBINDING SITE FOR RESIDUE CHL A 313
ChainResidue
AGLU63
ALEU64
AHIS68
ATRP71
AGLN131
AMET135
AGLY136
AGLU139
AARG142
AILE143
APHE192
ACLA307
ACHL310
ACHL311
CTRP46
CTHR48
CCHL305
CCLA306

site_idBC5
Number of Residues13
DetailsBINDING SITE FOR RESIDUE CLA A 314
ChainResidue
AARG70
AMET73
ATYR156
APRO157
AGLY158
APHE161
ALEU166
APHE173
ALEU176
AGLU180
ALUT301
ACHL312
ACLA316

site_idBC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CLA A 315
ChainResidue
ATRP16
ALYS179
ALYS182
AASN183
ALHG304
ACLA316

site_idBC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CLA A 316
ChainResidue
ALYS179
AASN183
ALEU186
ALUT301
ACLA314
ACLA315

site_idBC8
Number of Residues13
DetailsBINDING SITE FOR RESIDUE CLA A 317
ChainResidue
APHE189
ASER190
AGLY193
AGLN197
ATHR201
AASN208
AHIS212
AASN220
AALA221
ALUT301
ALHG304
ACLA318
BTRP128

site_idBC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CLA A 318
ChainResidue
AHIS212
ALEU213
APRO216
AASN220
ACLA317

site_idCC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CAC A 319
ChainResidue
AGLU107
AGLY108
AZN321
BGLY108
BHIS120
BGLN122
BCAC319

site_idCC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 320
ChainResidue
AASP54
BGLU31
BASP54
CASP54
CHOH449

site_idCC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN A 321
ChainResidue
AGLU107
ACAC319
BHIS120

site_idCC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN A 322
ChainResidue
AGLU207
AASP211
AHOH453

site_idCC5
Number of Residues14
DetailsBINDING SITE FOR RESIDUE LUT B 301
ChainResidue
BMET73
BPHE161
BASP162
BPRO163
BLEU164
BASN183
BSER190
BPHE194
BGLN197
BPRO205
BCHL312
BCLA314
BCLA316
BCLA317

site_idCC6
Number of Residues19
DetailsBINDING SITE FOR RESIDUE LUT B 302
ChainResidue
BTRP46
BASP47
BTHR48
BALA49
BHIS68
BTRP71
BALA72
BCYS79
BTRP97
BMET188
BMET191
BCLA306
BCLA307
BCLA308
BCHL310
BCHL311
BHOH427
CCLA307
CCHL313

site_idCC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NEX B 303
ChainResidue
BTYR112
BVAL138
BTYR141
BCLA308
BCHL310
BCHL312

site_idCC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE LHG B 304
ChainResidue
BTYR44
BLYS182
BLEU186
BCHL305
BCLA306
BCLA315
BCLA317

site_idCC9
Number of Residues10
DetailsBINDING SITE FOR RESIDUE CHL B 305
ChainResidue
BVAL22
BLYS23
BTYR24
BLEU25
BGLY26
BTRP46
BLHG304
BCLA306
CCHL311
CCHL313

site_idDC1
Number of Residues20
DetailsBINDING SITE FOR RESIDUE CLA B 306
ChainResidue
BLEU36
BPRO41
BGLY42
BTYR44
BGLY45
BTRP46
BASP47
BSER52
BASN61
BARG62
BGLU65
BHIS68
BARG185
BMET188
BPHE189
BLUT302
BLHG304
BCHL305
BCLA307
CCHL313

site_idDC2
Number of Residues11
DetailsBINDING SITE FOR RESIDUE CLA B 307
ChainResidue
ALUT302
ALHG304
ACLA307
BHIS68
BPHE195
BLUT302
BCLA306
BCHL311
BCHL313
BHOH402
CCLA307

site_idDC3
Number of Residues13
DetailsBINDING SITE FOR RESIDUE CLA B 308
ChainResidue
BLEU74
BGLY78
BPHE92
BGLU94
BGLN103
BLEU110
BTYR112
BLEU113
BLEU118
BLUT302
BNEX303
BCHL310
BHOH426

site_idDC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE CHL B 309
ChainResidue
BPRO116
BSER117
BLEU118
BVAL119
BHIS120
BALA121
BGLN122
BSER123
BCYS130
BCHL310

site_idDC5
Number of Residues17
DetailsBINDING SITE FOR RESIDUE CHL B 310
ChainResidue
BTRP71
BGLY101
BLEU110
BALA121
BILE127
BCYS130
BGLN131
BLEU134
BLUT302
BNEX303
BCLA308
BCHL309
BCHL311
BCHL313
BHOH401
BHOH412
BHOH418

site_idDC6
Number of Residues15
DetailsBINDING SITE FOR RESIDUE CHL B 311
ChainResidue
ACHL305
BPHE98
BLYS99
BGLY101
BSER102
BILE104
BPHE105
BGLN131
BPHE195
BLUT302
BCLA307
BCHL310
BCHL313
BHOH401
BHOH446

site_idDC7
Number of Residues20
DetailsBINDING SITE FOR RESIDUE CHL B 312
ChainResidue
BARG70
BTRP71
BLEU74
BVAL138
BTYR141
BARG142
BGLY146
BPRO147
BLEU148
BGLY149
BPRO154
BPRO157
BSER160
BPHE161
BPRO163
BLUT301
BNEX303
BCLA314
BHOH414
BHOH424

site_idDC8
Number of Residues19
DetailsBINDING SITE FOR RESIDUE CHL B 313
ChainResidue
ATRP46
ATHR48
ACHL305
ACLA306
BGLU63
BLEU64
BHIS68
BTRP71
BGLN131
BMET135
BGLY136
BGLU139
BARG142
BILE143
BPHE192
BILE199
BCLA307
BCHL310
BCHL311

site_idDC9
Number of Residues13
DetailsBINDING SITE FOR RESIDUE CLA B 314
ChainResidue
BARG70
BMET73
BTYR156
BPRO157
BGLY158
BPHE161
BLEU166
BPHE173
BLEU176
BGLU180
BLUT301
BCHL312
BCLA316

site_idEC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CLA B 315
ChainResidue
BTRP16
BLYS179
BLYS182
BLHG304
BCLA316

site_idEC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CLA B 316
ChainResidue
BLYS179
BASN183
BLEU186
BLUT301
BCLA314
BCLA315

site_idEC3
Number of Residues13
DetailsBINDING SITE FOR RESIDUE CLA B 317
ChainResidue
BPHE189
BSER190
BGLY193
BGLN197
BTHR201
BASN208
BHIS212
BASN220
BALA221
BLUT301
BLHG304
BCLA318
CTRP128

site_idEC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CLA B 318
ChainResidue
BHIS212
BLEU213
BASN220
BCLA317

site_idEC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CAC B 319
ChainResidue
AGLY108
AHIS120
AGLN122
ACAC319
BGLU107
BGLY108
BZN321

site_idEC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA B 320
ChainResidue
BGLU207
BASP211
BHOH444

site_idEC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN B 321
ChainResidue
AHIS120
BGLU107
BCAC319

site_idEC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA B 322
ChainResidue
ASER34
AHOH454
BASP20
BGLU56

site_idEC9
Number of Residues14
DetailsBINDING SITE FOR RESIDUE LUT C 301
ChainResidue
CMET73
CPHE161
CASP162
CPRO163
CLEU164
CASN183
CALA187
CSER190
CPHE194
CGLN197
CPRO205
CCLA314
CCLA316
CCLA317

site_idFC1
Number of Residues18
DetailsBINDING SITE FOR RESIDUE LUT C 302
ChainResidue
ACLA307
CTRP46
CASP47
CTHR48
CALA49
CHIS68
CALA72
CCYS79
CTRP97
CALA100
CMET188
CMET191
CCLA306
CCLA307
CCLA308
CCHL310
CCHL311
CHOH430

site_idFC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE NEX C 303
ChainResidue
CTYR112
CLEU134
CVAL138
CTYR141
CPRO147
CCLA308
CCHL310
CCHL312

site_idFC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE LHG C 304
ChainResidue
CTYR44
CLYS182
CLEU186
CCHL305
CCLA315
CCLA317
CHOH427

site_idFC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE CHL C 305
ChainResidue
ACHL311
ACHL313
CTYR24
CLEU25
CGLY26
CPRO27
CPHE28
CTRP46
CLHG304
CCLA306

site_idFC5
Number of Residues20
DetailsBINDING SITE FOR RESIDUE CLA C 306
ChainResidue
ACHL313
CLEU36
CPRO41
CGLY42
CTYR44
CGLY45
CTRP46
CASP47
CLEU51
CSER52
CASN61
CARG62
CGLU65
CHIS68
CARG185
CMET188
CPHE189
CLUT302
CCHL305
CCLA307

site_idFC6
Number of Residues11
DetailsBINDING SITE FOR RESIDUE CLA C 307
ChainResidue
ACLA307
BLUT302
BCLA307
CLEU64
CHIS68
CPHE195
CLUT302
CCLA306
CCHL311
CCHL313
CHOH424

site_idFC7
Number of Residues14
DetailsBINDING SITE FOR RESIDUE CLA C 308
ChainResidue
CLEU74
CGLY78
CPHE81
CPHE92
CGLU94
CGLN103
CLEU110
CTYR112
CLEU113
CLEU118
CLUT302
CNEX303
CCHL310
CHOH412

site_idFC8
Number of Residues11
DetailsBINDING SITE FOR RESIDUE CHL C 309
ChainResidue
CGLU107
CPRO116
CSER117
CLEU118
CVAL119
CHIS120
CALA121
CGLN122
CSER123
CALA126
CCHL310

site_idFC9
Number of Residues14
DetailsBINDING SITE FOR RESIDUE CHL C 310
ChainResidue
CGLY101
CALA121
CCYS130
CGLN131
CLEU134
CLUT302
CNEX303
CCLA308
CCHL309
CCHL311
CCHL313
CHOH417
CHOH429
CHOH431

site_idGC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE CHL C 311
ChainResidue
BCHL305
CPHE98
CLYS99
CGLY101
CSER102
CILE104
CPHE105
CGLN131
CPHE195
CLUT302
CCLA307
CCHL310
CCHL313
CHOH417
CHOH452

site_idGC2
Number of Residues21
DetailsBINDING SITE FOR RESIDUE CHL C 312
ChainResidue
CILE67
CARG70
CTRP71
CLEU74
CVAL138
CTYR141
CARG142
CGLY146
CPRO147
CLEU148
CGLY149
CPRO154
CPRO157
CSER160
CPHE161
CPRO163
CNEX303
CCLA314
CHOH418
CHOH421
CHOH432

site_idGC3
Number of Residues21
DetailsBINDING SITE FOR RESIDUE CHL C 313
ChainResidue
BTYR24
BTRP46
BTHR48
BLUT302
BCHL305
BCLA306
CGLU63
CLEU64
CHIS68
CTRP71
CGLN131
CMET135
CGLY136
CGLU139
CARG142
CILE143
CPHE192
CILE199
CCLA307
CCHL310
CCHL311

site_idGC4
Number of Residues13
DetailsBINDING SITE FOR RESIDUE CLA C 314
ChainResidue
CARG70
CMET73
CTYR156
CPRO157
CGLY158
CPHE161
CLEU166
CPHE173
CLEU176
CGLU180
CLUT301
CCHL312
CCLA316

site_idGC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CLA C 315
ChainResidue
CTRP16
CVAL80
CLYS179
CLYS182
CASN183
CLHG304
CCLA316

site_idGC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CLA C 316
ChainResidue
CLYS179
CASN183
CLEU186
CLUT301
CCLA314
CCLA315

site_idGC7
Number of Residues12
DetailsBINDING SITE FOR RESIDUE CLA C 317
ChainResidue
ATRP128
CPHE189
CSER190
CGLY193
CGLN197
CASN208
CHIS212
CASN220
CALA221
CLUT301
CLHG304
CCLA318

site_idGC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CLA C 318
ChainResidue
CHIS212
CLEU213
CASN220
CCLA317
CHOH443

site_idGC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CAC C 319
ChainResidue
CGLU107
CGLY108
CGLY108
CHIS120
CGLN122
CZN321

site_idHC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA C 320
ChainResidue
CLYS203
CGLU207
CASP211
CHOH447
CHOH450

site_idHC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN C 321
ChainResidue
CGLU107
CHIS120
CCAC319

site_idHC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE NA C 322
ChainResidue
CGLU171
CGLU171

site_idHC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA C 323
ChainResidue
BGLU31
CASP54
CHOH449

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues180
DetailsTRANSMEM: Helical => ECO:0000255
ChainResidueDetails
AVAL66-ALA86
ALEU118-VAL138
ALEU186-LEU206
BVAL66-ALA86
BLEU118-VAL138
BLEU186-LEU206
CVAL66-ALA86
CLEU118-VAL138
CLEU186-LEU206

site_idSWS_FT_FI2
Number of Residues27
DetailsBINDING: axial binding residue => ECO:0000269|PubMed:15029188, ECO:0000269|PubMed:24482437
ChainResidueDetails
ATYR24
BTYR24
BGLU65
BHIS68
BVAL119
BGLU139
BGLU180
BASN183
BGLN197
BHIS212
CTYR24
AGLU65
CGLU65
CHIS68
CVAL119
CGLU139
CGLU180
CASN183
CGLN197
CHIS212
AHIS68
AVAL119
AGLU139
AGLU180
AASN183
AGLN197
AHIS212

site_idSWS_FT_FI3
Number of Residues36
DetailsBINDING:
ChainResidueDetails
ATRP46
AARG185
AALA221
APHE228
BTRP46
BSER52
BARG70
BGLN103
BLEU113
BSER123
BARG142
ASER52
BLEU148
BLYS179
BARG185
BALA221
BPHE228
CTRP46
CSER52
CARG70
CGLN103
CLEU113
AARG70
CSER123
CARG142
CLEU148
CLYS179
CARG185
CALA221
CPHE228
AGLN103
ALEU113
ASER123
AARG142
ALEU148
ALYS179

site_idSWS_FT_FI4
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P07371
ChainResidueDetails
AGLN131
BGLN131
CGLN131

227344

PDB entries from 2024-11-13

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