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4LBY

Identifying ligand binding hot spots in proteins using brominated fragments

Functional Information from GO Data
ChainGOidnamespacecontents
A0003746molecular_functiontranslation elongation factor activity
A0003924molecular_functionGTPase activity
A0005525molecular_functionGTP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006412biological_processtranslation
A0006414biological_processtranslational elongation
Functional Information from PDB Data
site_idAC1
Number of Residues24
DetailsBINDING SITE FOR RESIDUE GNP A 501
ChainResidue
AVAL20
ATHR62
AGLY84
AASN136
ALYS137
AASP139
AMET140
ASER174
AALA175
ALEU176
AGLN354
AASP21
AMG502
AHOH601
AHOH628
AHOH657
AHOH662
AHIS22
AGLY23
ALYS24
ATHR25
ATHR26
ATYR47
AILE61

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 502
ChainResidue
ATHR25
ATHR62
AGNP501
AHOH657
AHOH662

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NH4 A 503
ChainResidue
AILE50
AASP51
AGLU56
ATHR62
AASN64
AHOH602

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 504
ChainResidue
AMET113
AARG117

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 505
ChainResidue
AARG59
AHIS85

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 506
ChainResidue
ALYS248
AARG291

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 507
ChainResidue
AARG330
AHIS331
ATHR332
AARG393

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 508
ChainResidue
AARG57
AGLY358
AHOH675

site_idAC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 509
ChainResidue
AGLN181
AARG184

Functional Information from PROSITE/UniProt
site_idPS00301
Number of Residues16
DetailsG_TR_1 Translational (tr)-type guanine nucleotide-binding (G) domain signature. DKapeERaRGITIntA
ChainResidueDetails
AASP51-ALA66

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING:
ChainResidueDetails
AASP81
AASN136
AGLY18

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: Phosphothreonine => ECO:0000250
ChainResidueDetails
ATHR394

219869

PDB entries from 2024-05-15

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