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4LBV

Identifying ligand binding hot spots in proteins using brominated fragments

Functional Information from GO Data
ChainGOidnamespacecontents
A0003746molecular_functiontranslation elongation factor activity
A0003924molecular_functionGTPase activity
A0005525molecular_functionGTP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006412biological_processtranslation
A0006414biological_processtranslational elongation
Functional Information from PDB Data
site_idAC1
Number of Residues28
DetailsBINDING SITE FOR RESIDUE GNP A 501
ChainResidue
AVAL20
ATHR62
AGLY84
AASN136
ALYS137
AASP139
AMET140
ASER174
AALA175
ALEU176
AGLN354
AASP21
AMG502
AHOH604
AHOH607
AHOH608
AHOH628
AHOH769
AHOH819
AHOH846
AHOH847
AHIS22
AGLY23
ALYS24
ATHR25
ATHR26
ATYR47
AILE61

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 502
ChainResidue
ATHR25
ATHR62
AGNP501
AHOH604
AHOH608

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NH4 A 503
ChainResidue
AILE50
AASP51
AGLU56
ATHR62
AASN64
AHOH603

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 504
ChainResidue
AARG234
AGLU271
AGLY287

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 505
ChainResidue
AMET113
APRO114
AARG117
AHOH791

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 506
ChainResidue
AARG59
AHIS85

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 507
ChainResidue
ATYR130
AARG295
AHOH706
AHOH841

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 508
ChainResidue
ALYS248
AARG291
AHOH658

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 509
ChainResidue
AARG330
AHIS331
ATHR332
AARG393

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 510
ChainResidue
AGLN181
AARG184
AASN185

site_idBC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 511
ChainResidue
AARG57
AGLY358
AHOH671

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 512
ChainResidue
ALYS45
AHIS67
AHIS273
AHOH820

Functional Information from PROSITE/UniProt
site_idPS00301
Number of Residues16
DetailsG_TR_1 Translational (tr)-type guanine nucleotide-binding (G) domain signature. DKapeERaRGITIntA
ChainResidueDetails
AASP51-ALA66

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING:
ChainResidueDetails
AGLY18
AASP81
AASN136

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: Phosphothreonine => ECO:0000250
ChainResidueDetails
ATHR394

225946

PDB entries from 2024-10-09

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