4L8K

Crystal structure of a putative peptidase (PARMER_02772) from Parabacteroides merdae ATCC 43184 at 2.26 A resolution

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0006508	biological_process	proteolysis
A	0008236	molecular_function	serine-type peptidase activity
B	0006508	biological_process	proteolysis
B	0008236	molecular_function	serine-type peptidase activity
C	0006508	biological_process	proteolysis
C	0008236	molecular_function	serine-type peptidase activity
D	0006508	biological_process	proteolysis
D	0008236	molecular_function	serine-type peptidase activity

Functional Information from PDB Data

site_id	AC1
Number of Residues	9
Details	BINDING SITE FOR RESIDUE PO4 A 401

Chain	Residue
A	HIS86
A	SER241
A	GLY266
A	SER267
A	GLY268
A	LEU269
A	ARG282
A	SER284
A	MPD402

---

site_id	AC2
Number of Residues	8
Details	BINDING SITE FOR RESIDUE MPD A 402

Chain	Residue
A	GLY85
A	HIS86
A	ASN88
A	TRP99
A	TYR102
A	TYR240
A	ARG282
A	PO4401

---

site_id	AC3
Number of Residues	7
Details	BINDING SITE FOR RESIDUE MPD A 403

Chain	Residue
A	THR197
A	GLY198
A	VAL217
A	ASP245
A	ASN248
A	VAL288
A	GLU311

---

site_id	AC4
Number of Residues	1
Details	BINDING SITE FOR RESIDUE CL A 404

Chain	Residue
A	GLU152

---

site_id	AC5
Number of Residues	9
Details	BINDING SITE FOR RESIDUE PO4 B 401

Chain	Residue
B	HIS86
B	SER241
B	GLY266
B	SER267
B	GLY268
B	PRO270
B	ARG282
B	SER284
B	MPD403

---

site_id	AC6
Number of Residues	6
Details	BINDING SITE FOR RESIDUE PO4 B 402

Chain	Residue
B	GLY151
B	GLU152
B	ASN153
B	LYS315
B	ARG317
B	HOH511

---

site_id	AC7
Number of Residues	9
Details	BINDING SITE FOR RESIDUE MPD B 403

Chain	Residue
B	GLY85
B	HIS86
B	ASN88
B	TRP99
B	TYR102
B	TYR240
B	SER241
B	ARG282
B	PO4401

---

site_id	AC8
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MPD B 404

Chain	Residue
B	ASN67
C	ASP73
C	LYS77

---

site_id	AC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MRD B 405

Chain	Residue
A	TRP99
B	GLY127
B	HOH564

---

site_id	BC1
Number of Residues	10
Details	BINDING SITE FOR RESIDUE PO4 C 401

Chain	Residue
C	HIS86
C	SER241
C	GLY266
C	SER267
C	GLY268
C	LEU269
C	PRO270
C	ARG282
C	SER284
C	HOH672

---

site_id	BC2
Number of Residues	5
Details	BINDING SITE FOR RESIDUE PO4 C 402

Chain	Residue
C	ASP121
C	LYS131
C	ARG132
C	HIS161
C	PO4403

---

site_id	BC3
Number of Residues	5
Details	BINDING SITE FOR RESIDUE PO4 C 403

Chain	Residue
B	LYS163
C	LYS123
C	HIS161
C	PO4402
C	HOH629

---

site_id	BC4
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MPD C 404

Chain	Residue
C	MSE180
C	SER183
C	ASP184
C	THR197
C	LYS315
C	MRD405

---

site_id	BC5
Number of Residues	7
Details	BINDING SITE FOR RESIDUE MRD C 405

Chain	Residue
C	THR197
C	GLY198
C	VAL217
C	ASN248
C	LEU269
C	MPD404
C	HOH638

---

site_id	BC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MRD C 406

Chain	Residue
C	ARG251
C	ASP290
C	ASN292

---

site_id	BC7
Number of Residues	1
Details	BINDING SITE FOR RESIDUE CL C 407

Chain	Residue
C	LYS166

---

site_id	BC8
Number of Residues	4
Details	BINDING SITE FOR RESIDUE PO4 D 401

Chain	Residue
D	ASP121
D	LYS131
D	ARG132
D	HIS161

---

site_id	BC9
Number of Residues	8
Details	BINDING SITE FOR RESIDUE PO4 D 402

Chain	Residue
D	SER267
D	GLY268
D	LEU269
D	ARG282
D	SER284
D	HIS86
D	SER241
D	GLY266

---

site_id	CC1
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MPD D 403

Chain	Residue
D	ILE124
D	GLY126

---

site_id	CC2
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MPD D 404

Chain	Residue
C	SER92
D	ASN153
D	ASN154
D	LYS315
D	HOH512
D	HOH571

---