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4L5N

Crystallographic Structure of HHV-1 Uracil-DNA Glycosylase complexed with the Bacillus phage PZA inhibitor protein p56

Functional Information from GO Data
ChainGOidnamespacecontents
A0004844molecular_functionuracil DNA N-glycosylase activity
A0006281biological_processDNA repair
A0006284biological_processbase-excision repair
A0016799molecular_functionhydrolase activity, hydrolyzing N-glycosyl compounds
B0004844molecular_functionuracil DNA N-glycosylase activity
B0006281biological_processDNA repair
B0006284biological_processbase-excision repair
B0016799molecular_functionhydrolase activity, hydrolyzing N-glycosyl compounds
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACT A 301
ChainResidue
AGLN87
AASP88
AHOH411
CASP35
CVAL38
CHOH208

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT A 302
ChainResidue
AHIS203
ATYR231
APRO200
AARG201
AVAL202

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT A 303
ChainResidue
ALYS216
AHOH410
DTYR40
DTHR43
DILE47

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT A 304
ChainResidue
AARG174
AALA177
AILE196
AHOH440

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT A 305
ChainResidue
AVAL25
ATYR52
AASN53
AHOH551

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ACT A 306
ChainResidue
DSER32
DLEU33
DSER34

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACT A 307
ChainResidue
ATYR124
AALA127
AILE240
AASP241
ATRP242
ASER243

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT B 301
ChainResidue
BTYR124
BALA127
BASP241
BTRP242
BSER243

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT B 302
ChainResidue
BGLN87
BASP88
BHOH453
EASP35
EVAL38

site_idBC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE ACT C 101
ChainResidue
AARG73
ATYR74
AARG140
CASP53
CLYS54
DILE48
DLYS49
DACT101

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT D 101
ChainResidue
AARG73
ATYR74
CACT101
DGLN23

site_idBC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ACT E 101
ChainResidue
BARG230
EGLN23
ETYR25

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACT F 101
ChainResidue
AHIS47
DGLY30
FASP18
FLYS22
FGLN23
FTYR24

site_idBC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT F 102
ChainResidue
BLYS216
BHOH401
FTYR40
FTHR43
FILE47

site_idBC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT F 103
ChainResidue
APRO38
AASN42
AARG175
FTYR27
FLYS29

Functional Information from PROSITE/UniProt
site_idPS00130
Number of Residues10
DetailsU_DNA_GLYCOSYLASE Uracil-DNA glycosylase signature. RVVIiGQDPY
ChainResidueDetails
AARG81-TYR90

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor => ECO:0000255|HAMAP-Rule:MF_04046
ChainResidueDetails
AASP88
BASP88

237735

PDB entries from 2025-06-18

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