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4KPY

DNA binding protein and DNA complex structure

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0003723molecular_functionRNA binding
A0004519molecular_functionendonuclease activity
A0004520molecular_functionDNA endonuclease activity
A0006260biological_processDNA replication
A0030145molecular_functionmanganese ion binding
A0044355biological_processclearance of foreign intracellular DNA
A0046872molecular_functionmetal ion binding
B0003676molecular_functionnucleic acid binding
B0003677molecular_functionDNA binding
B0003723molecular_functionRNA binding
B0004519molecular_functionendonuclease activity
B0004520molecular_functionDNA endonuclease activity
B0006260biological_processDNA replication
B0030145molecular_functionmanganese ion binding
B0044355biological_processclearance of foreign intracellular DNA
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE TMP A 701
ChainResidue
AASN195
AILE254
APRO255
AHIS256
AHOH893
BPRO37
BGLY38
BARG39
ATYR197
AARG200
ATRP202
ALEU217
APRO218
ATYR226
AHIS227
AARG232

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN A 702
ChainResidue
AASP478
AASP660
AMN703
AHOH822
DDT10
DHOH107

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MN A 703
ChainResidue
AASP478
AASP546
AMN702
AHOH803
AHOH806
DDT10
NDC9

site_idAC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE TMP B 701
ChainResidue
APRO37
AGLY38
AARG39
BTYR197
BARG200
BTYR226
BHIS227
BARG232
BPRO255
BHIS256

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MN B 702
ChainResidue
BASP478
BASP546
BMN703
BHOH801
BHOH936
FDT10
MDC9

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN B 703
ChainResidue
BASP478
BASP660
BMN702
BHOH823
BHOH867
FDT10

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN C 101
ChainResidue
AVAL685
AHOH824
CDT1
CDA3
CHOH202

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN E 101
ChainResidue
BVAL685
BHOH838
EDT1
EDA3
EHOH203

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsACT_SITE: ACT_SITE => ECO:0000305|PubMed:18754009, ECO:0000305|PubMed:19092929, ECO:0000305|PubMed:24374628, ECO:0000305|PubMed:28911094
ChainResidueDetails
AASP478
AASP546
AASP660
BASP478
BASP546
BASP660

site_idSWS_FT_FI2
Number of Residues2
DetailsACT_SITE: ACT_SITE => ECO:0000305|PubMed:24374628, ECO:0000305|PubMed:28911094
ChainResidueDetails
AGLU512
BGLU512

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:24374628, ECO:0000305|PubMed:19812667, ECO:0000305|PubMed:28911094, ECO:0007744|PDB:4KPY, ECO:0007744|PDB:4N76
ChainResidueDetails
AASP478
BASP478

site_idSWS_FT_FI4
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:24374628, ECO:0000305|PubMed:19092929, ECO:0000305|PubMed:19812667, ECO:0000305|PubMed:28911094, ECO:0007744|PDB:4KPY, ECO:0007744|PDB:4N76
ChainResidueDetails
AASP546
AASP660
BASP546
BASP660

site_idSWS_FT_FI5
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:24374628, ECO:0000305|PubMed:18754009, ECO:0000305|PubMed:19092929, ECO:0000305|PubMed:19812667, ECO:0000305|PubMed:28911094, ECO:0007744|PDB:4KPY, ECO:0007744|PDB:4N76
ChainResidueDetails
AVAL685
BVAL685

224572

PDB entries from 2024-09-04

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