4K28
2.15 Angstrom resolution crystal structure of a shikimate dehydrogenase family protein from Pseudomonas putida KT2440 in complex with NAD+
Replaces: 3TUMFunctional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0004764 | molecular_function | shikimate 3-dehydrogenase (NADP+) activity |
A | 0005829 | cellular_component | cytosol |
A | 0009423 | biological_process | chorismate biosynthetic process |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0019632 | biological_process | shikimate metabolic process |
A | 0046872 | molecular_function | metal ion binding |
A | 0050661 | molecular_function | NADP binding |
B | 0000166 | molecular_function | nucleotide binding |
B | 0004764 | molecular_function | shikimate 3-dehydrogenase (NADP+) activity |
B | 0005829 | cellular_component | cytosol |
B | 0009423 | biological_process | chorismate biosynthetic process |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0019632 | biological_process | shikimate metabolic process |
B | 0046872 | molecular_function | metal ion binding |
B | 0050661 | molecular_function | NADP binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 23 |
Details | BINDING SITE FOR RESIDUE NAD A 301 |
Chain | Residue |
A | ILE131 |
A | ALA194 |
A | SER195 |
A | PRO196 |
A | MET199 |
A | VAL224 |
A | GLY247 |
A | MET250 |
A | ALA251 |
A | GLN254 |
A | HOH403 |
A | GLY132 |
A | HOH501 |
A | HOH520 |
A | HOH531 |
A | HOH533 |
A | GLY134 |
A | GLY135 |
A | VAL136 |
A | CYS155 |
A | ASP156 |
A | PRO157 |
A | ARG161 |
site_id | AC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MN A 302 |
Chain | Residue |
A | CYS155 |
A | PHE182 |
A | LEU207 |
site_id | AC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MN A 303 |
Chain | Residue |
A | CYS166 |
A | VAL178 |
site_id | AC4 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MN A 304 |
Chain | Residue |
A | CYS34 |
site_id | AC5 |
Number of Residues | 22 |
Details | BINDING SITE FOR RESIDUE NAD B 301 |
Chain | Residue |
B | ILE131 |
B | GLY132 |
B | GLY134 |
B | GLY135 |
B | VAL136 |
B | CYS155 |
B | ASP156 |
B | PRO157 |
B | ARG161 |
B | ALA194 |
B | SER195 |
B | PRO196 |
B | MET199 |
B | VAL224 |
B | THR226 |
B | GLY247 |
B | ALA251 |
B | GLN254 |
B | HOH428 |
B | HOH445 |
B | HOH491 |
B | HOH511 |
site_id | AC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE NA B 302 |
Chain | Residue |
B | VAL68 |
B | PRO69 |
B | TYR70 |
B | LYS71 |
site_id | AC7 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MN B 303 |
Chain | Residue |
B | CYS34 |
site_id | AC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MN B 304 |
Chain | Residue |
B | CYS155 |
B | PHE182 |
B | LEU207 |
site_id | AC9 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MN B 305 |
Chain | Residue |
B | CYS166 |
B | VAL178 |