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4JYF

X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters.

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0016491molecular_functionoxidoreductase activity
A0016740molecular_functiontransferase activity
A0042364biological_processwater-soluble vitamin biosynthetic process
A0044272biological_processsulfur compound biosynthetic process
A0046872molecular_functionmetal ion binding
A0051536molecular_functioniron-sulfur cluster binding
A0051537molecular_function2 iron, 2 sulfur cluster binding
A0051539molecular_function4 iron, 4 sulfur cluster binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SF4 A 401
ChainResidue
ACYS63
ACYS67
ACYS70
ASAH402

site_idAC2
Number of Residues19
DetailsBINDING SITE FOR RESIDUE SAH A 402
ChainResidue
AARG180
AMET199
APRO229
AILE231
ATYR303
ALEU305
ATYR306
ASF4401
AHOH511
AHOH517
AHOH519
AHOH528
AHOH567
AHOH808
ATYR69
ASER108
ASER136
AARG159
AGLU161

site_idAC3
Number of Residues19
DetailsBINDING SITE FOR RESIDUE 1N7 A 403
ChainResidue
AGLN98
APHE99
AGLY100
APRO276
AGLY277
AGLU280
AARG284
AMET324
ALEU330
A1N7406
A1N7407
AHOH508
AHOH544
AHOH594
AHOH605
AHOH718
AHOH774
AHOH830
AHOH869

site_idAC4
Number of Residues13
DetailsBINDING SITE FOR RESIDUE 1N7 A 404
ChainResidue
ALYS37
AASP40
ALYS170
AARG284
ASER297
ALYS315
AASP316
ATHR317
AHOH598
AHOH642
AHOH669
AHOH687
AHOH693

site_idAC5
Number of Residues10
DetailsBINDING SITE FOR RESIDUE 1N7 A 405
ChainResidue
AARG29
AGLU33
ATHR247
ALEU250
A1N7406
AHOH593
AHOH597
AHOH603
AHOH793
AHOH833

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE 1N7 A 406
ChainResidue
ATHR317
AALA318
A1N7403
A1N7405
AHOH628
AHOH831
AHOH842

site_idAC7
Number of Residues9
DetailsBINDING SITE FOR RESIDUE 1N7 A 407
ChainResidue
ALYS128
AMET324
AGLU328
A1N7403
AHOH701
AHOH734
AHOH763
AHOH764
AHOH791

site_idAC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE H2S A 408
ChainResidue
ACYS311
ACYS319

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A 409
ChainResidue
ATHR268
AALA270
ATYR306
AHOH808
AHOH823

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 410
ChainResidue
AARG54
ATHR134
AARG155

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 411
ChainResidue
AARG159
APRO266
AHOH638
AHOH822

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CO3 A 412
ChainResidue
APHE246
AHOH552
AHOH583
AHOH773

Functional Information from PROSITE/UniProt
site_idPS00216
Number of Residues18
DetailsSUGAR_TRANSPORT_1 Sugar transport proteins signature 1. VMKMIELLGRKpgrdwgG
ChainResidueDetails
AVAL323-GLY340

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsBINDING: BINDING => ECO:0000255|PIRSR:PIRSR004762-1, ECO:0000269|PubMed:16137685, ECO:0000269|PubMed:18400755, ECO:0000269|PubMed:19706452, ECO:0007744|PDB:3CIW, ECO:0007744|PDB:3CIX, ECO:0007744|PDB:3IIX
ChainResidueDetails
ACYS63

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000255|PIRSR:PIRSR004762-1, ECO:0000269|PubMed:16137685, ECO:0007744|PDB:3CIW, ECO:0007744|PDB:3CIX, ECO:0007744|PDB:3IIX
ChainResidueDetails
ACYS67
ACYS70

site_idSWS_FT_FI3
Number of Residues1
DetailsBINDING: BINDING => ECO:0007744|PDB:3CIX, ECO:0007744|PDB:3IIZ, ECO:0007744|PDB:4JXC, ECO:0007744|PDB:4JY8, ECO:0007744|PDB:4JY9, ECO:0007744|PDB:4JYE
ChainResidueDetails
ACYS311

site_idSWS_FT_FI4
Number of Residues2
DetailsBINDING: BINDING => ECO:0007744|PDB:3CIX, ECO:0007744|PDB:4JY8, ECO:0007744|PDB:4JY9, ECO:0007744|PDB:4JYE
ChainResidueDetails
ACYS319
ACSO322

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PDB entries from 2024-07-17

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