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4JWH

Crystal structure of spTrm10(Full length)-SAH complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0002939biological_processtRNA N1-guanine methylation
A0005634cellular_componentnucleus
A0005730cellular_componentnucleolus
A0005737cellular_componentcytoplasm
A0008033biological_processtRNA processing
A0008168molecular_functionmethyltransferase activity
A0032259biological_processmethylation
A0052905molecular_functiontRNA (guanosine(9)-N1)-methyltransferase activity
B0000049molecular_functiontRNA binding
B0002939biological_processtRNA N1-guanine methylation
B0005634cellular_componentnucleus
B0005730cellular_componentnucleolus
B0005737cellular_componentcytoplasm
B0008033biological_processtRNA processing
B0008168molecular_functionmethyltransferase activity
B0032259biological_processmethylation
B0052905molecular_functiontRNA (guanosine(9)-N1)-methyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues19
DetailsBINDING SITE FOR RESIDUE SAH A 401
ChainResidue
ALEU183
ACYS215
ALYS228
ALEU229
ALYS241
AILE242
ALEU243
AVAL248
AHOH505
AHOH506
AHOH523
ASER184
AALA185
AILE202
AGLY203
AASP207
AASN209
ATYR211
ALEU214

site_idAC2
Number of Residues18
DetailsBINDING SITE FOR RESIDUE SAH B 401
ChainResidue
BLEU183
BSER184
BALA185
BILE202
BGLY203
BILE205
BASP207
BASN209
BTYR211
BLEU214
BCYS215
BLYS228
BLEU229
BILE242
BLEU243
BVAL248
BHOH503
BHOH504

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor => ECO:0000269|PubMed:24081582
ChainResidueDetails
AASP207
BASP207

site_idSWS_FT_FI2
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:24081582
ChainResidueDetails
ALEU183
BCYS215
BLEU229
BLYS241
AGLY203
AASP207
ACYS215
ALEU229
ALYS241
BLEU183
BGLY203
BASP207

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0000269|PubMed:18257517
ChainResidueDetails
ASER296
BSER296

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PDB entries from 2024-07-24

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