Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4JV1

Ternary complex of gamma-OHPDG adduct modified dna with dna (-1 primer) polymerase iv and incoming dgtp

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0003677molecular_functionDNA binding
A0003684molecular_functiondamaged DNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005737cellular_componentcytoplasm
A0006260biological_processDNA replication
A0006261biological_processDNA-templated DNA replication
A0006281biological_processDNA repair
A0006974biological_processDNA damage response
A0016740molecular_functiontransferase activity
A0016779molecular_functionnucleotidyltransferase activity
A0034061molecular_functionDNA polymerase activity
A0042276biological_processerror-prone translesion synthesis
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues17
DetailsBINDING SITE FOR RESIDUE DGT A 401
ChainResidue
ATYR10
ACA402
ACA403
AHOH501
AHOH503
AHOH504
AHOH558
BDC604
BHN1605
APHE11
ATYR12
AALA44
ATHR45
ATYR48
AARG51
AASP105
ALYS159

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A 402
ChainResidue
AASP7
APHE8
AASP105
ADGT401

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A 403
ChainResidue
AASP7
AASP105
AGLU106
ADGT401

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CA A 404
ChainResidue
AALA181
AILE186
AHOH506

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues184
DetailsDomain: {"description":"UmuC"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsActive site: {}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsSite: {"description":"Substrate discrimination"}
ChainResidueDetails

239492

PDB entries from 2025-07-30

PDB statisticsPDBj update infoContact PDBjnumon