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4JST

Structure of Clostridium thermocellum polynucleotide kinase bound to UTP

Functional Information from GO Data
ChainGOidnamespacecontents
A0002098biological_processtRNA wobble uridine modification
A0006357biological_processregulation of transcription by RNA polymerase II
B0002098biological_processtRNA wobble uridine modification
B0006357biological_processregulation of transcription by RNA polymerase II
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 201
ChainResidue
ASER22
AUTP202
AHOH306
AHOH308
AHOH316

site_idAC2
Number of Residues22
DetailsBINDING SITE FOR RESIDUE UTP A 202
ChainResidue
AGLY20
ALYS21
ASER22
ATHR23
AASP38
AARG116
AARG120
AARG123
AMG201
AHOH306
AHOH308
AHOH316
AHOH321
AHOH363
AHOH369
AHOH410
AHOH426
AHOH432
ASER16
ASER17
AGLY18
ASER19

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 201
ChainResidue
BSER22
BUTP202
BHOH301
BHOH302
BHOH303

site_idAC4
Number of Residues22
DetailsBINDING SITE FOR RESIDUE UTP B 202
ChainResidue
BSER16
BSER17
BGLY18
BSER19
BGLY20
BLYS21
BSER22
BTHR23
BARG116
BARG120
BMG201
BHOH301
BHOH302
BHOH303
BHOH329
BHOH332
BHOH335
BHOH347
BHOH350
BHOH361
BHOH376
BHOH399

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA B 203
ChainResidue
BPHE24
BHOH317
BHOH391
BHOH405
BHOH428

222415

PDB entries from 2024-07-10

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