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4JMR

A unique spumavirus gag N-terminal domain with functional properties of orthoretroviral Matrix and Capsid

Functional Information from GO Data
ChainGOidnamespacecontents
A0019028cellular_componentviral capsid
A0019076biological_processviral release from host cell
A0030430cellular_componenthost cell cytoplasm
A0042025cellular_componenthost cell nucleus
A0044163cellular_componenthost cytoskeleton
A0046718biological_processsymbiont entry into host cell
A0075521biological_processmicrotubule-dependent intracellular transport of viral material towards nucleus
B0019028cellular_componentviral capsid
B0019076biological_processviral release from host cell
B0030430cellular_componenthost cell cytoplasm
B0042025cellular_componenthost cell nucleus
B0044163cellular_componenthost cytoskeleton
B0046718biological_processsymbiont entry into host cell
B0075521biological_processmicrotubule-dependent intracellular transport of viral material towards nucleus
C0019028cellular_componentviral capsid
C0019076biological_processviral release from host cell
C0030430cellular_componenthost cell cytoplasm
C0042025cellular_componenthost cell nucleus
C0044163cellular_componenthost cytoskeleton
C0046718biological_processsymbiont entry into host cell
C0075521biological_processmicrotubule-dependent intracellular transport of viral material towards nucleus
D0019028cellular_componentviral capsid
D0019076biological_processviral release from host cell
D0030430cellular_componenthost cell cytoplasm
D0042025cellular_componenthost cell nucleus
D0044163cellular_componenthost cytoskeleton
D0046718biological_processsymbiont entry into host cell
D0075521biological_processmicrotubule-dependent intracellular transport of viral material towards nucleus
Functional Information from PDB Data
site_idAC1
Number of Residues14
DetailsBINDING SITE FOR CHAIN E OF ENV PROTEIN
ChainResidue
AGLN137
DASN63
DPRO65
DLEU66
DGLN67
DPRO69
DVAL14
DLEU17
DVAL18
DASN29
DPRO30
DLEU31
DHIS32
DGLN59

site_idAC2
Number of Residues15
DetailsBINDING SITE FOR CHAIN F OF ENV PROTEIN
ChainResidue
BVAL18
BPRO30
BLEU31
BHIS32
BLEU58
BGLN59
BASP61
BASN63
BPRO65
BLEU66
BGLN67
BPRO69
CTRP44
CASP101
CGLN137

site_idAC3
Number of Residues11
DetailsBINDING SITE FOR CHAIN G OF ENV PROTEIN
ChainResidue
AGLU15
AASN29
APRO30
ALEU31
AHIS32
ALEU58
AGLN59
AASN63
APRO65
ALEU66
APRO69

site_idAC4
Number of Residues11
DetailsBINDING SITE FOR CHAIN H OF ENV PROTEIN
ChainResidue
CVAL18
CLEU21
CASN29
CPRO30
CLEU31
CHIS32
CLEU58
CGLN59
CLEU66
CGLN67
CPRO69

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PDB entries from 2024-07-17

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