4JMR

A unique spumavirus gag N-terminal domain with functional properties of orthoretroviral Matrix and Capsid

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0019028	cellular_component	viral capsid
A	0019076	biological_process	viral release from host cell
A	0030430	cellular_component	host cell cytoplasm
A	0042025	cellular_component	host cell nucleus
A	0044163	cellular_component	host cytoskeleton
A	0046718	biological_process	symbiont entry into host cell
A	0075521	biological_process	microtubule-dependent intracellular transport of viral material towards nucleus
B	0019028	cellular_component	viral capsid
B	0019076	biological_process	viral release from host cell
B	0030430	cellular_component	host cell cytoplasm
B	0042025	cellular_component	host cell nucleus
B	0044163	cellular_component	host cytoskeleton
B	0046718	biological_process	symbiont entry into host cell
B	0075521	biological_process	microtubule-dependent intracellular transport of viral material towards nucleus
C	0019028	cellular_component	viral capsid
C	0019076	biological_process	viral release from host cell
C	0030430	cellular_component	host cell cytoplasm
C	0042025	cellular_component	host cell nucleus
C	0044163	cellular_component	host cytoskeleton
C	0046718	biological_process	symbiont entry into host cell
C	0075521	biological_process	microtubule-dependent intracellular transport of viral material towards nucleus
D	0019028	cellular_component	viral capsid
D	0019076	biological_process	viral release from host cell
D	0030430	cellular_component	host cell cytoplasm
D	0042025	cellular_component	host cell nucleus
D	0044163	cellular_component	host cytoskeleton
D	0046718	biological_process	symbiont entry into host cell
D	0075521	biological_process	microtubule-dependent intracellular transport of viral material towards nucleus

Functional Information from PDB Data

site_id	AC1
Number of Residues	14
Details	BINDING SITE FOR CHAIN E OF ENV PROTEIN

Chain	Residue
A	GLN137
D	ASN63
D	PRO65
D	LEU66
D	GLN67
D	PRO69
D	VAL14
D	LEU17
D	VAL18
D	ASN29
D	PRO30
D	LEU31
D	HIS32
D	GLN59

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site_id	AC2
Number of Residues	15
Details	BINDING SITE FOR CHAIN F OF ENV PROTEIN

Chain	Residue
B	VAL18
B	PRO30
B	LEU31
B	HIS32
B	LEU58
B	GLN59
B	ASP61
B	ASN63
B	PRO65
B	LEU66
B	GLN67
B	PRO69
C	TRP44
C	ASP101
C	GLN137

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site_id	AC3
Number of Residues	11
Details	BINDING SITE FOR CHAIN G OF ENV PROTEIN

Chain	Residue
A	GLU15
A	ASN29
A	PRO30
A	LEU31
A	HIS32
A	LEU58
A	GLN59
A	ASN63
A	PRO65
A	LEU66
A	PRO69

---

site_id	AC4
Number of Residues	11
Details	BINDING SITE FOR CHAIN H OF ENV PROTEIN

Chain	Residue
C	VAL18
C	LEU21
C	ASN29
C	PRO30
C	LEU31
C	HIS32
C	LEU58
C	GLN59
C	LEU66
C	GLN67
C	PRO69

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI2
Number of Residues	92
Details	Region: {"description":"Involved in viral assembly and export","evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

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