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4JL1

Crystal structure of a bacterial fucosidase with a multivalent iminocyclitol inhibitor

Functional Information from GO Data
ChainGOidnamespacecontents
A0004560molecular_functionalpha-L-fucosidase activity
A0005764cellular_componentlysosome
A0005975biological_processcarbohydrate metabolic process
A0006004biological_processfucose metabolic process
A0016139biological_processglycoside catabolic process
A0016787molecular_functionhydrolase activity
B0004560molecular_functionalpha-L-fucosidase activity
B0005764cellular_componentlysosome
B0005975biological_processcarbohydrate metabolic process
B0006004biological_processfucose metabolic process
B0016139biological_processglycoside catabolic process
B0016787molecular_functionhydrolase activity
Functional Information from PDB Data
site_idAC1
Number of Residues12
DetailsBINDING SITE FOR RESIDUE LM5 A 501
ChainResidue
AHIS66
AHOH820
AHOH840
AHOH1164
AGLU87
ATRP88
AHIS135
AHIS136
ATYR178
AASP229
ATRP232
ATRP316

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 502
ChainResidue
ATRP232
AARG262
AARG271
AHIS272

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 503
ChainResidue
ALYS90
AALA97
AHOH772

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 504
ChainResidue
AVAL81
ATYR82
AGLY83
AHOH676
AHOH955
AHOH1124

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE IMD A 505
ChainResidue
ATRP117
AMET120
ATYR168
APHE359

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE IMD A 506
ChainResidue
ALYS90
ASER91
ATRP184
ATYR191
AHOH1125

site_idAC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IMD A 507
ChainResidue
AASN375
AARG376

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 508
ChainResidue
AASN169
AGLY172
AASP174
ALYS224
AHOH602
AHOH984

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL A 509
ChainResidue
ATHR310
AGLU313
AASN314

site_idBC1
Number of Residues11
DetailsBINDING SITE FOR RESIDUE LM5 B 501
ChainResidue
BHIS66
BGLU87
BTRP88
BHIS135
BHIS136
BTYR178
BTRP227
BASP229
BTRP232
BTRP316
BHOH711

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 502
ChainResidue
BTRP232
BARG262
BARG271
BHIS272
BHOH1079

site_idBC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 B 503
ChainResidue
BTYR82
BGLY83
BGLY84
BTRP92
BHOH766
BHOH807
BHOH834

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 504
ChainResidue
BLYS90
BPRO96
BALA97
BHOH810
BHOH811
BHOH1082

site_idBC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE IMD B 505
ChainResidue
BTRP117
BMET120
BTYR168
BPHE359

site_idBC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE IMD B 506
ChainResidue
BARG399
BASP403
BVAL469

site_idBC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE IMD B 507
ChainResidue
BGLN354
BASP358
BPHE359
BARG360
BPRO361
BHOH926

site_idBC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE GOL B 508
ChainResidue
BTRP241
BHOH1080

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PDB entries from 2024-08-07

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