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4JK9

Open and closed forms of wild-type human PRP8 RNase H-like domain with bound Co ion

Functional Information from GO Data
ChainGOidnamespacecontents
A0000398biological_processmRNA splicing, via spliceosome
A0005681cellular_componentspliceosomal complex
B0000398biological_processmRNA splicing, via spliceosome
B0005681cellular_componentspliceosomal complex
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CO A 2001
ChainResidue
AASP1922
AHIS1965
AHIS1966
AHOH2269
AHOH2356
AHOH2388

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CO A 2002
ChainResidue
AHOH2369
AHOH2383
AGLU1843
AHOH2347
AHOH2351

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 2003
ChainResidue
AGLU1911
APRO1912
AHOH2197
AHOH2256
BLEU1905
BLYS1908
BGLN1913

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 2004
ChainResidue
ASER1929
ATYR1930
BHOH2181

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CO B 2001
ChainResidue
BASP1781
BHOH2153
BHOH2172
BHOH2279
BHOH2320

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CO B 2002
ChainResidue
AGLU1856
AHOH2327
AHOH2363
BGLU1856
BHOH2240
BHOH2280
BHOH2319

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CO B 2003
ChainResidue
BASP1922
BHIS1965
BHIS1966
BHOH2283
BHOH2317
BHOH2330

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CO B 2004
ChainResidue
AGLU1873
AHOH2121
BGLU1888
BHOH2226
BHOH2292

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 2005
ChainResidue
BTHR1824
BALA1837
BHOH2155

site_idBC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL B 2006
ChainResidue
BSER1825
BLYS1840

221051

PDB entries from 2024-06-12

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