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4JHT

Crystal Structure of AlkB in complex with 5-carboxy-8-hydroxyquinoline (IOX1)

Functional Information from GO Data
ChainGOidnamespacecontents
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006281biological_processDNA repair
A0006307biological_processDNA alkylation repair
A0008198molecular_functionferrous iron binding
A0035513biological_processoxidative RNA demethylation
A0035515molecular_functionoxidative RNA demethylase activity
A0035516molecular_functionbroad specificity oxidative DNA demethylase activity
A0042245biological_processRNA repair
A0046872molecular_functionmetal ion binding
A0051213molecular_functiondioxygenase activity
A0070989biological_processoxidative demethylation
A0072702biological_processresponse to methyl methanesulfonate
Functional Information from PDB Data
site_idAC1
Number of Residues14
DetailsBINDING SITE FOR RESIDUE 8XQ A 301
ChainResidue
ATYR122
ATHR208
AMN304
AHOH552
AHOH571
AHOH657
ALEU128
AHIS131
AASP133
ASER145
AHIS187
AILE189
AARG204
AASN206

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN A 304
ChainResidue
AHIS131
AASP133
AHIS187
A8XQ301
AHOH552

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT A 302
ChainResidue
ATYR122
AILE189
AARG204
AASN206

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE DMS A 303
ChainResidue
AMET57
ASER129
AHOH423
AHOH628

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:16482161, ECO:0000269|PubMed:20084272
ChainResidueDetails
ATRP69
AASP135
AARG161

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING:
ChainResidueDetails
ATYR76
AASN120
AARG204

site_idSWS_FT_FI3
Number of Residues3
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00805, ECO:0000269|PubMed:16482161
ChainResidueDetails
AHIS131
AASP133
AHIS187

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PDB entries from 2024-09-04

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