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4JFT

Crystal structure of a bacterial fucosidase with iminosugar inhibitor N-desmethyl-4-epi-(+)-Codonopsinine

Functional Information from GO Data
ChainGOidnamespacecontents
A0004560molecular_functionalpha-L-fucosidase activity
A0005764cellular_componentlysosome
A0005975biological_processcarbohydrate metabolic process
A0006004biological_processfucose metabolic process
A0016139biological_processglycoside catabolic process
A0016787molecular_functionhydrolase activity
B0004560molecular_functionalpha-L-fucosidase activity
B0005764cellular_componentlysosome
B0005975biological_processcarbohydrate metabolic process
B0006004biological_processfucose metabolic process
B0016139biological_processglycoside catabolic process
B0016787molecular_functionhydrolase activity
Functional Information from PDB Data
site_idAC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE 1KN A 501
ChainResidue
AHIS66
AGLU87
ATRP88
AHIS135
ATYR178
AASP229
ATRP232
ATRP316
AIMD506

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 502
ChainResidue
AARG262
AARG271
AHIS272
AIMD506

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 503
ChainResidue
ALYS90
APRO96
AALA97
AHOH792
AHOH796

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE IMD A 504
ChainResidue
ATRP117
AMET120
ATYR168
APHE359

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE IMD A 505
ChainResidue
AARG399
AASP403
AHOH733

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE IMD A 506
ChainResidue
ATRP232
A1KN501
ASO4502

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 507
ChainResidue
AASN169
AGLY172
AASP174
ALYS224
AHOH604
AHOH761

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 508
ChainResidue
AALA71
ATYR318
AGLN354
AALA355
AASP356
AHOH689

site_idAC9
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 509
ChainResidue
ALYS145
ATYR146
AASN211
ALYS214
AGLU215
ATHR218
AARG219
BGLU252

site_idBC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE 1KN B 501
ChainResidue
BHIS66
BGLU87
BTRP88
BHIS135
BTYR178
BTRP227
BASP229
BTRP232
BTRP316

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 502
ChainResidue
BTRP232
BARG262
BARG271
BHIS272

site_idBC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 B 503
ChainResidue
BVAL81
BTYR82
BGLY83

site_idBC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE IMD B 504
ChainResidue
BTRP117
BMET120
BTYR168
BPHE359

site_idBC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IMD B 505
ChainResidue
BHOH781

site_idBC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IMD B 506
ChainResidue
BGLN302
BHOH708

site_idBC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 507
ChainResidue
BGLN354
BASP356
BASP358
BPHE359
BPRO361
BHOH773

site_idBC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 508
ChainResidue
APRO143
ALYS145
AALA152
AHOH692
BPRO255
BHOH671

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PDB entries from 2024-09-18

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