4JF2

Structure of a class II preQ1 riboswitch reveals ligand recognition by a new fold

Functional Information from PDB Data

site_id	AC1
Number of Residues	7
Details	BINDING SITE FOR RESIDUE PRF A 101

Chain	Residue
A	C30
A	U31
A	U41
A	G42
A	A70
A	A71
A	HOH203

---

site_id	AC2
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CS A 102

Chain	Residue
A	U57
A	G9
A	A10

---

site_id	AC3
Number of Residues	5
Details	BINDING SITE FOR RESIDUE CS A 103

Chain	Residue
A	U51
A	A52
A	U53
A	G64
A	G65

---

site_id	AC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE CS A 104

Chain	Residue
A	G58
A	G59
A	HOH348
A	HOH349

---

site_id	AC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CS A 105

Chain	Residue
A	C5
A	C6
A	U17

---

site_id	AC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CS A 106

Chain	Residue
A	C48
A	G49
A	U57

---

site_id	AC7
Number of Residues	2
Details	BINDING SITE FOR RESIDUE CS A 107

Chain	Residue
A	U51
A	U53

---

site_id	AC8
Number of Residues	1
Details	BINDING SITE FOR RESIDUE CS A 108

Chain	Residue
A	GTP1

---

site_id	AC9
Number of Residues	4
Details	BINDING SITE FOR RESIDUE CS A 109

Chain	Residue
A	A24
A	A52
A	C69
A	HOH347

---

site_id	BC1
Number of Residues	2
Details	BINDING SITE FOR RESIDUE CS A 110

Chain	Residue
A	C6
A	G7

---

site_id	BC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE CS A 111

Chain	Residue
A	C66
A	C67

---

site_id	BC3
Number of Residues	2
Details	BINDING SITE FOR RESIDUE CS A 112

Chain	Residue
A	C37
A	C38

---

site_id	BC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE CS A 113

Chain	Residue
A	C22
A	G23
A	U53
A	HOH243

---

site_id	BC5
Number of Residues	2
Details	BINDING SITE FOR RESIDUE CS A 114

Chain	Residue
A	A11
A	U40

---

site_id	BC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CS A 115

Chain	Residue
A	GTP1
A	G16
A	U17

---

site_id	BC7
Number of Residues	2
Details	BINDING SITE FOR RESIDUE CS A 116

Chain	Residue
A	GTP1
A	G2

---

site_id	BC8
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 117

Chain	Residue
A	U41
A	HOH312
A	HOH313
A	HOH314
A	HOH315
A	HOH316

---

site_id	BC9
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 118

Chain	Residue
A	U53
A	A70
A	HOH317
A	HOH318
A	HOH319
A	HOH320

---

site_id	CC1
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 119

Chain	Residue
A	G42
A	HOH326
A	HOH327
A	HOH328
A	HOH329
A	HOH330

---

site_id	CC2
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 120

Chain	Residue
A	A10
A	HOH331
A	HOH332
A	HOH333
A	HOH334
A	HOH335

---