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4JCE

L54F Variant of JC Polyomavirus Major Capsid Protein VP1

Functional Information from GO Data
ChainGOidnamespacecontents
A0005198molecular_functionstructural molecule activity
A0019028cellular_componentviral capsid
B0005198molecular_functionstructural molecule activity
B0019028cellular_componentviral capsid
C0005198molecular_functionstructural molecule activity
C0019028cellular_componentviral capsid
D0005198molecular_functionstructural molecule activity
D0019028cellular_componentviral capsid
E0005198molecular_functionstructural molecule activity
E0019028cellular_componentviral capsid
Functional Information from PDB Data
site_idAC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A 301
ChainResidue
ASER62
AILE63
ASER64
ASER69
AASP70
ASER71
APRO72
AHOH528
EHIS121

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL B 301
ChainResidue
AHIS121
BSER62
BSER64
BSER69
BASP70
BSER71
BPRO72
BHOH497

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 302
ChainResidue
BHIS142
BLEU226
BHIS227
BARG276
BHOH502
BHOH510

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 303
ChainResidue
BGLU208
BASN209
BARG211
BASP238
BGLY243
BPRO244

site_idAC5
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL C 301
ChainResidue
BHIS121
CSER62
CSER64
CSER69
CASP70
CSER71
CPRO72
CMET76
CHOH526
CHOH596

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL C 302
ChainResidue
CHIS142
CPHE144
CGLY214
CTHR215
CHOH502
CHOH620

site_idAC7
Number of Residues11
DetailsBINDING SITE FOR RESIDUE GOL D 301
ChainResidue
AASP65
CHIS121
DSER62
DSER64
DSER69
DASP70
DSER71
DPRO72
DHOH478
DHOH551
EARG265

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO D 302
ChainResidue
BHOH586
BHOH587
DPRO88
DHOH516

site_idAC9
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL E 301
ChainResidue
DHIS121
ESER62
ESER64
ESER69
EASP70
ESER71
EPRO72
EHOH517

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO E 302
ChainResidue
EHIS142
EGLY214
ETHR215
EGOL303

site_idBC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL E 303
ChainResidue
EHIS142
ETHR215
EPRO224
EVAL225
EEDO302
EHOH413
EHOH421
EHOH449

site_idBC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL E 304
ChainResidue
EGLU208
EASN209
EARG211
EASP238
EGLY243
EPRO244
ELEU245

Functional Information from PROSITE/UniProt
site_idPS00178
Number of Residues12
DetailsAA_TRNA_LIGASE_I Aminoacyl-transfer RNA synthetases class-I signature. PnlNEdLTCGNI
ChainResidueDetails
APRO88-ILE99

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PDB entries from 2024-07-17

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