Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0000287 | molecular_function | magnesium ion binding |
A | 0000956 | biological_process | nuclear-transcribed mRNA catabolic process |
A | 0003723 | molecular_function | RNA binding |
A | 0003729 | molecular_function | mRNA binding |
A | 0004518 | molecular_function | nuclease activity |
A | 0004527 | molecular_function | exonuclease activity |
A | 0005634 | cellular_component | nucleus |
A | 0005829 | cellular_component | cytosol |
A | 0006402 | biological_process | mRNA catabolic process |
A | 0008409 | molecular_function | 5'-3' exonuclease activity |
A | 0016787 | molecular_function | hydrolase activity |
A | 0034353 | molecular_function | mRNA 5'-diphosphatase activity |
A | 0046872 | molecular_function | metal ion binding |
A | 0050779 | biological_process | RNA destabilization |
A | 0071028 | biological_process | nuclear mRNA surveillance |
A | 0090304 | biological_process | nucleic acid metabolic process |
A | 0110152 | molecular_function | RNA NAD+-cap (NAD+-forming) hydrolase activity |
A | 0110155 | biological_process | NAD-cap decapping |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 29 |
Details | BINDING SITE FOR RESIDUE GTG A 401 |
Chain | Residue |
A | ARG58 |
A | CYS217 |
A | GLY233 |
A | GLU234 |
A | LYS255 |
A | LYS276 |
A | TRP277 |
A | GLN280 |
A | 9MG403 |
A | HOH532 |
A | HOH533 |
A | ARG95 |
A | HOH587 |
A | HOH646 |
A | HOH652 |
A | HOH682 |
A | HOH699 |
A | HOH702 |
A | HOH708 |
A | HOH868 |
A | HOH877 |
A | HOH899 |
A | GLU97 |
A | GLU101 |
A | TRP131 |
A | ARG132 |
A | GLY133 |
A | THR136 |
A | LYS137 |
site_id | AC2 |
Number of Residues | 30 |
Details | BINDING SITE FOR RESIDUE GTG A 402 |
Chain | Residue |
A | TYR70 |
A | PRO72 |
A | PRO73 |
A | PRO74 |
A | ILE75 |
A | ASN76 |
A | GLN150 |
A | GLU166 |
A | PRO168 |
A | LEU303 |
A | LYS304 |
A | THR305 |
A | SER354 |
A | SER364 |
A | HIS366 |
A | TYR371 |
A | EDO404 |
A | HOH519 |
A | HOH526 |
A | HOH528 |
A | HOH538 |
A | HOH542 |
A | HOH567 |
A | HOH568 |
A | HOH683 |
A | HOH687 |
A | HOH743 |
A | HOH766 |
A | HOH829 |
A | HOH884 |
site_id | AC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE 9MG A 403 |
Chain | Residue |
A | GLN280 |
A | GTG401 |
site_id | AC4 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE EDO A 404 |
Chain | Residue |
A | TYR70 |
A | HIS288 |
A | VAL290 |
A | THR305 |
A | GTG402 |
A | EDO405 |
A | HOH516 |
A | HOH589 |
A | HOH829 |
site_id | AC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO A 405 |
Chain | Residue |
A | ASN239 |
A | VAL365 |
A | EDO404 |
A | HOH829 |
A | HOH928 |
Functional Information from SwissProt/UniProt
Chain | Residue | Details |
A | ARG58 | |
A | TRP131 | |
A | GLU234 | |
A | LYS255 | |
A | GLN280 | |
Chain | Residue | Details |
A | GLU101 | |
A | GLU192 | |
A | CYS217 | |
Chain | Residue | Details |
A | MET185 | |
Chain | Residue | Details |
A | ASP236 | |
Chain | Residue | Details |
A | GLU253 | |
A | LEU254 | |