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4J28

Crystal structure of a gh29 alpha-l-fucosidase gh29 from bacteroides thetaiotaomicron in complex with a 5-membered iminocyclitol inhibitor

Functional Information from GO Data
ChainGOidnamespacecontents
A0004560molecular_functionalpha-L-fucosidase activity
A0005764cellular_componentlysosome
A0005975biological_processcarbohydrate metabolic process
A0006004biological_processfucose metabolic process
A0016139biological_processglycoside catabolic process
A0016787molecular_functionhydrolase activity
B0004560molecular_functionalpha-L-fucosidase activity
B0005764cellular_componentlysosome
B0005975biological_processcarbohydrate metabolic process
B0006004biological_processfucose metabolic process
B0016139biological_processglycoside catabolic process
B0016787molecular_functionhydrolase activity
Functional Information from PDB Data
site_idAC1
Number of Residues10
DetailsBINDING SITE FOR RESIDUE EAT A 501
ChainResidue
AHIS66
AIMD505
AGLU87
ATRP88
AHIS135
AHIS136
ATYR178
AASP229
ATRP232
ATRP316

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE IMD A 502
ChainResidue
AALA63
ATRP117
AMET120
ATYR168
APHE359

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE IMD A 503
ChainResidue
ATRP88
AHOH720
AHOH990

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE IMD A 504
ChainResidue
AGLU288
ATHR310
AGLU313
AASN314
ATRP316

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE IMD A 505
ChainResidue
ATRP232
AEAT501
ASO4507

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IMD A 506
ChainResidue
AARG399
AVAL405

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 507
ChainResidue
ATRP232
AARG262
AARG271
AHIS272
AIMD505

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 508
ChainResidue
ALYS90
AALA97
AHOH806

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 509
ChainResidue
ALYS145
AGLU215
ATHR218
AHOH707
BGLU252

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 510
ChainResidue
AASN169
AGLY172
AASP174
ALYS224
AHOH621
AHOH917

site_idBC2
Number of Residues11
DetailsBINDING SITE FOR RESIDUE EAT B 501
ChainResidue
BHIS66
BGLU87
BTRP88
BHIS135
BHIS136
BTYR178
BTRP227
BASP229
BTRP232
BTRP316
BHOH792

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE IMD B 502
ChainResidue
BTRP117
BMET120
BTYR168
BPHE359

site_idBC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 503
ChainResidue
BTRP232
BARG262
BARG271
BHIS272

site_idBC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL B 504
ChainResidue
BGLU416
BVAL454
BPRO455
BLYS456
BASN458
BHOH620
BHOH839
BHOH840
BHOH897

221051

PDB entries from 2024-06-12

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