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4J07

Crystal structure of a PROBABLE RIBOFLAVIN SYNTHASE, BETA CHAIN RIBH (6,7-dimethyl-8-ribityllumazine synthase, DMRL synthase, Lumazine synthase) from Mycobacterium leprae

Functional Information from GO Data
ChainGOidnamespacecontents
A0000906molecular_function6,7-dimethyl-8-ribityllumazine synthase activity
A0005829cellular_componentcytosol
A0009231biological_processriboflavin biosynthetic process
A0009349cellular_componentriboflavin synthase complex
A0016740molecular_functiontransferase activity
B0000906molecular_function6,7-dimethyl-8-ribityllumazine synthase activity
B0005829cellular_componentcytosol
B0009231biological_processriboflavin biosynthetic process
B0009349cellular_componentriboflavin synthase complex
B0016740molecular_functiontransferase activity
C0000906molecular_function6,7-dimethyl-8-ribityllumazine synthase activity
C0005829cellular_componentcytosol
C0009231biological_processriboflavin biosynthetic process
C0009349cellular_componentriboflavin synthase complex
C0016740molecular_functiontransferase activity
D0000906molecular_function6,7-dimethyl-8-ribityllumazine synthase activity
D0005829cellular_componentcytosol
D0009231biological_processriboflavin biosynthetic process
D0009349cellular_componentriboflavin synthase complex
D0016740molecular_functiontransferase activity
E0000906molecular_function6,7-dimethyl-8-ribityllumazine synthase activity
E0005829cellular_componentcytosol
E0009231biological_processriboflavin biosynthetic process
E0009349cellular_componentriboflavin synthase complex
E0016740molecular_functiontransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 201
ChainResidue
AALA70
AHIS73
ATHR110
AHOH327
AHOH363
AHOH375

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 202
ChainResidue
AHOH309
AHOH340
BARG128
DLYS123
AGLY85
AASP86
ATHR87

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA B 201
ChainResidue
BALA70
BHIS73
BTHR110
BHOH344
BHOH353
BHOH366

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 202
ChainResidue
BASP86
BTHR87
BHOH345
CLYS123
EARG128
EHOH327

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA C 201
ChainResidue
CALA70
CHIS73
CTHR110
CHOH309
CHOH328
CHOH393

site_idAC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 C 202
ChainResidue
BLYS123
CGLY85
CASP86
CTHR87
CHOH347
CHOH369
DARG128
DHOH384

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 D 201
ChainResidue
ALYS123
AARG128
DASP86
DTHR87
DHOH357
DHOH370

site_idAC8
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 D 202
ChainResidue
AASN95
AGLN99
BASN95
CASN95
CGLN99
DASN95
DGLN99
EASN95
EGLN99

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA D 203
ChainResidue
DALA70
DHIS73
DTHR110
DHOH326
DHOH329
DHOH334

site_idBC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 E 201
ChainResidue
CARG128
EGLY85
EASP86
ETHR87
ELYS123
EHOH324
EHOH343

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA E 202
ChainResidue
EALA70
EHIS73
ETHR110
EHOH316
EHOH328
EHOH369

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues5
DetailsACT_SITE: Proton donor => ECO:0000255|HAMAP-Rule:MF_00178
ChainResidueDetails
AHIS89
BHIS89
CHIS89
DHIS89
EHIS89

site_idSWS_FT_FI2
Number of Residues30
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00178
ChainResidueDetails
AARG128
BTRP27
BALA59
BVAL81
BASP86
BASN114
BARG128
CTRP27
CALA59
CVAL81
CASP86
CASN114
CARG128
DTRP27
DALA59
DVAL81
DASP86
DASN114
DARG128
ETRP27
EALA59
EVAL81
EASP86
EASN114
EARG128
ATRP27
AALA59
AVAL81
AASP86
AASN114

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PDB entries from 2024-06-12

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