Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4IXM

Crystal structure of Zn(II)-bound YjiA GTPase from E. coli

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003924molecular_functionGTPase activity
A0005525molecular_functionGTP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006974biological_processDNA damage response
A0008270molecular_functionzinc ion binding
A0016787molecular_functionhydrolase activity
A0042802molecular_functionidentical protein binding
A0046872molecular_functionmetal ion binding
A0046914molecular_functiontransition metal ion binding
A0051604biological_processprotein maturation
A0140827molecular_functionzinc chaperone activity
B0000166molecular_functionnucleotide binding
B0003924molecular_functionGTPase activity
B0005525molecular_functionGTP binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006974biological_processDNA damage response
B0008270molecular_functionzinc ion binding
B0016787molecular_functionhydrolase activity
B0042802molecular_functionidentical protein binding
B0046872molecular_functionmetal ion binding
B0046914molecular_functiontransition metal ion binding
B0051604biological_processprotein maturation
B0140827molecular_functionzinc chaperone activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 401
ChainResidue
AGLU37
AGLU39
AGLU42
ACYS66

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 402
ChainResidue
AGLU74
AHIS114
BGLU74
BHIS114

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN A 403
ChainResidue
AHIS170
BHIS187
AGLU167

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN A 404
ChainResidue
AHIS187
BGLU167

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 405
ChainResidue
ASER113
AHIS114
AGLU115
AHOH511

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 401
ChainResidue
BGLU37
BGLU39
BGLU42
BCYS66

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 B 402
ChainResidue
BSER113
BHIS114
BGLU115

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues182
DetailsDomain: {"description":"CobW C-terminal","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsMotif: {"description":"CXCC motif","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues18
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P9WPZ1","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues14
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"24449932","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsBinding site: {"description":"in other chain","evidences":[{"source":"PubMed","id":"24449932","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

246333

PDB entries from 2025-12-17

PDB statisticsPDBj update infoContact PDBjnumon