4IVM
Structure of human protoporphyrinogen IX oxidase(R59G)
Functional Information from GO Data
Chain | GOid | namespace | contents |
B | 0004729 | molecular_function | oxygen-dependent protoporphyrinogen oxidase activity |
B | 0005739 | cellular_component | mitochondrion |
B | 0005743 | cellular_component | mitochondrial inner membrane |
B | 0005758 | cellular_component | mitochondrial intermembrane space |
B | 0006779 | biological_process | porphyrin-containing compound biosynthetic process |
B | 0006782 | biological_process | protoporphyrinogen IX biosynthetic process |
B | 0006783 | biological_process | heme biosynthetic process |
B | 0006784 | biological_process | heme A biosynthetic process |
B | 0006785 | biological_process | heme B biosynthetic process |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0031966 | cellular_component | mitochondrial membrane |
B | 0048034 | biological_process | heme O biosynthetic process |
B | 0050660 | molecular_function | flavin adenine dinucleotide binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE ACJ B 501 |
Chain | Residue |
B | ARG97 |
B | LEU344 |
B | GLY345 |
B | ILE346 |
B | VAL347 |
B | MET368 |
B | ILE419 |
B | FAD502 |
B | HOH602 |
B | ARG168 |
B | GLY169 |
B | VAL170 |
B | ALA172 |
B | PHE331 |
B | GLY332 |
B | HIS333 |
B | LEU334 |
site_id | AC2 |
Number of Residues | 32 |
Details | BINDING SITE FOR RESIDUE FAD B 502 |
Chain | Residue |
B | GLY9 |
B | GLY11 |
B | ILE12 |
B | SER13 |
B | VAL33 |
B | GLU34 |
B | SER35 |
B | GLY41 |
B | TRP42 |
B | LEU56 |
B | GLY57 |
B | PRO58 |
B | GLY60 |
B | PRO256 |
B | VAL257 |
B | ALA285 |
B | ILE286 |
B | VAL316 |
B | GLY448 |
B | ALA449 |
B | VAL454 |
B | ALA455 |
B | VAL456 |
B | CYS459 |
B | ACJ501 |
B | HOH611 |
B | HOH613 |
B | HOH640 |
B | HOH641 |
B | HOH643 |
B | HOH647 |
B | HOH662 |
site_id | AC3 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL B 503 |
Chain | Residue |
B | GLY425 |
B | GLN428 |
B | LYS429 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL B 504 |
Chain | Residue |
B | SER182 |
B | ALA214 |
B | ARG434 |
B | GLU452 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 7 |
Details | BINDING: BINDING => ECO:0000269|PubMed:21048046 |
Chain | Residue | Details |
B | GLY9 | |
B | GLU34 | |
B | TRP42 | |
B | GLY57 | |
B | VAL257 | |
B | ALA449 | |
B | VAL454 |