Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4HNO

High resolution crystal structure of DNA Apurinic/apyrimidinic (AP) endonuclease IV Nfo from Thermatoga maritima

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003906molecular_functionDNA-(apurinic or apyrimidinic site) endonuclease activity
A0004519molecular_functionendonuclease activity
A0006281biological_processDNA repair
A0006284biological_processbase-excision repair
A0008081molecular_functionphosphoric diester hydrolase activity
A0008270molecular_functionzinc ion binding
A0008833molecular_functiondeoxyribonuclease IV (phage-T4-induced) activity
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN A 301
ChainResidue
AHIS69
AHIS109
AGLU144
AMN304
AZN305
AHOH786

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN A 302
ChainResidue
ATRS307
AEDO308
AHIS181
AASP228
AHIS230

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 303
ChainResidue
AHIS181
AASP228
AHIS230
ATRS307
AEDO308

site_idAC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE MN A 304
ChainResidue
AGLU144
AASP178
AHIS181
AHIS215
AGLU260
AZN301
ATRS307
AEDO308
AHOH786

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN A 305
ChainResidue
AGLU144
AASP178
AHIS215
AGLU260
AZN301
AHOH786

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 306
ChainResidue
AHOH613
AHOH717
AHOH754
AHOH780
AHOH824
AHOH826

site_idAC7
Number of Residues14
DetailsBINDING SITE FOR RESIDUE TRS A 307
ChainResidue
ATYR72
AHIS109
AHIS181
AASP228
AHIS230
AMN302
AZN303
AMN304
AHOH614
AHOH688
AHOH701
AHOH711
AHOH786
AHOH823

site_idAC8
Number of Residues10
DetailsBINDING SITE FOR RESIDUE EDO A 308
ChainResidue
ATYR72
AHIS181
AASP228
AHIS230
AMN302
AZN303
AMN304
AHOH614
AHOH786
AHOH823

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 309
ChainResidue
AARG127
AASP188
ATHR190
AHOH411

site_idBC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A 310
ChainResidue
AGLU47
ALYS51
AARG54
ALYS220
AHOH722
AHOH747
AHOH750
AHOH810

Functional Information from PROSITE/UniProt
site_idPS00729
Number of Residues9
DetailsAP_NUCLEASE_F2_1 AP endonucleases family 2 signature 1. HSgYLINLA
ChainResidueDetails
AHIS69-ALA77

site_idPS00730
Number of Residues8
DetailsAP_NUCLEASE_F2_2 AP endonucleases family 2 signature 2. AITYDTCH
ChainResidueDetails
AALA174-HIS181

site_idPS00731
Number of Residues17
DetailsAP_NUCLEASE_F2_3 AP endonucleases family 2 signature 3. IHlNDSkyplGaakDrH
ChainResidueDetails
AILE214-HIS230

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues9
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00152
ChainResidueDetails
AGLU144
AASP178
AHIS181
AHIS215
AASP228
AHIS230
AGLU260
AHIS69
AHIS109

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon