Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4HM2

Naphthalene 1,2-Dioxygenase bound to ethylphenylsulfide

Functional Information from GO Data
ChainGOidnamespacecontents
A0005506molecular_functioniron ion binding
A0009056biological_processcatabolic process
A0018625molecular_functionnaphthalene 1,2-dioxygenase activity
A0044237biological_processobsolete cellular metabolic process
A0046872molecular_functionmetal ion binding
A0051213molecular_functiondioxygenase activity
A0051537molecular_function2 iron, 2 sulfur cluster binding
B0009056biological_processcatabolic process
B0019380biological_process3-phenylpropionate catabolic process
B0051213molecular_functiondioxygenase activity
Functional Information from PDB Data
site_idAC1
Number of Residues10
DetailsBINDING SITE FOR RESIDUE EDO A 1001
ChainResidue
ALEU31
AGLN377
APHE35
AALA36
AMET59
AGLY60
AILE61
AASP62
APHE152
ATYR376

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE EDO A 1002
ChainResidue
AHIS18
AVAL80
ACYS81
AARG82
ASER381
AASP382
AHOH1115
AHOH1160
AHOH1175

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 1003
ChainResidue
ALEU128
AASN129
ALYS130
ALYS131
AHOH1352

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE FES A 1004
ChainResidue
ACYS81
AHIS83
AARG84
ACYS101
AHIS104
ATRP106

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FE A 1005
ChainResidue
AHIS208
AHIS213
AASP362
AHOH1251

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE 16M A 1006
ChainResidue
AASN201
AASP205
AVAL260
AHIS295
AASN297
ALEU307
AHOH1596

site_idAC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO B 1001
ChainResidue
BTYR87
BGLN101
BMET190
BVAL191
BPHE192
BHOH1113
BHOH1118
BHOH1286

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 1002
ChainResidue
BASN90
BGLN93
BHOH1154
BHOH1217

site_idAC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO B 1003
ChainResidue
BALA157
BGLU159
BPHE176
BVAL177
BASP178
BHOH1125
BHOH1303

site_idBC1
Number of Residues10
DetailsBINDING SITE FOR RESIDUE EDO B 1004
ChainResidue
APRO49
AALA50
AASP53
AHOH1211
BARG77
BTYR78
BLYS79
BLEU80
BHOH1247
BHOH1314

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 1005
ChainResidue
BGLN62
BGLN64
BHOH1175
BHOH1194
BHOH1240
BHOH1253

site_idBC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 B 1006
ChainResidue
BGLY58
BSER59
BGLU60
BGLY165
BGLU166
BLYS171
BHOH1301

site_idBC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 1007
ChainResidue
APRO118
APHE119
BHOH1210
BHOH1293

site_idBC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO B 1008
ChainResidue
BGLU82
BALA83
BASN85
BHOH1236
BHOH1258

site_idBC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 1009
ChainResidue
ALYS245
ATRP439
AHIS440
BHOH1166
BHOH1188
BHOH1208

Functional Information from PROSITE/UniProt
site_idPS00570
Number of Residues24
DetailsRING_HYDROXYL_ALPHA Bacterial ring hydroxylating dioxygenases alpha-subunit signature. CrHRGktlvsveaGNakgfvCsYH
ChainResidueDetails
ACYS81-HIS104

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon