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4HDG

Crystal Structure of viral RdRp in complex with GTP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003968molecular_functionRNA-directed RNA polymerase activity
A0005524molecular_functionATP binding
A0039694biological_processviral RNA genome replication
B0003968molecular_functionRNA-directed RNA polymerase activity
B0005524molecular_functionATP binding
B0039694biological_processviral RNA genome replication
Functional Information from PDB Data
site_idAC1
Number of Residues13
DetailsBINDING SITE FOR RESIDUE GTP A 1001
ChainResidue
ALYS463
ASER799
ATRP800
ASER801
AHOH1260
ALYS471
AARG474
AASP541
ASER604
AASP668
AASP669
AARG734
AARG742

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1002
ChainResidue
AGLU440
AHIS444
ACYS449
ACYS452

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1003
ChainResidue
AHIS717
ACYS733
ACYS852
AHOH1309

site_idAC4
Number of Residues14
DetailsBINDING SITE FOR RESIDUE GTP B 1001
ChainResidue
BARG460
BLYS463
BLYS471
BARG474
BASP541
BSER604
BASN613
BASP668
BASP669
BARG734
BARG742
BSER799
BTRP800
BSER801

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 1002
ChainResidue
BGLU440
BHIS444
BCYS449
BCYS452

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 1003
ChainResidue
BHIS717
BCYS733
BCYS852
BHOH1344

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues304
DetailsDomain: {"description":"RdRp catalytic","evidences":[{"source":"PROSITE-ProRule","id":"PRU00539","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues14
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"24293643","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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