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4H5O

Crystal Structure of Rift Valley Fever Virus Nucleocapsid Protein Pentamer Bound to Single-stranded RNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0019013cellular_componentviral nucleocapsid
A0019028cellular_componentviral capsid
A0030430cellular_componenthost cell cytoplasm
A0042025cellular_componenthost cell nucleus
A0042802molecular_functionidentical protein binding
A0044172cellular_componenthost cell endoplasmic reticulum-Golgi intermediate compartment
A0044177cellular_componenthost cell Golgi apparatus
A1990904cellular_componentribonucleoprotein complex
B0003723molecular_functionRNA binding
B0019013cellular_componentviral nucleocapsid
B0019028cellular_componentviral capsid
B0030430cellular_componenthost cell cytoplasm
B0042025cellular_componenthost cell nucleus
B0042802molecular_functionidentical protein binding
B0044172cellular_componenthost cell endoplasmic reticulum-Golgi intermediate compartment
B0044177cellular_componenthost cell Golgi apparatus
B1990904cellular_componentribonucleoprotein complex
C0003723molecular_functionRNA binding
C0019013cellular_componentviral nucleocapsid
C0019028cellular_componentviral capsid
C0030430cellular_componenthost cell cytoplasm
C0042025cellular_componenthost cell nucleus
C0042802molecular_functionidentical protein binding
C0044172cellular_componenthost cell endoplasmic reticulum-Golgi intermediate compartment
C0044177cellular_componenthost cell Golgi apparatus
C1990904cellular_componentribonucleoprotein complex
D0003723molecular_functionRNA binding
D0019013cellular_componentviral nucleocapsid
D0019028cellular_componentviral capsid
D0030430cellular_componenthost cell cytoplasm
D0042025cellular_componenthost cell nucleus
D0042802molecular_functionidentical protein binding
D0044172cellular_componenthost cell endoplasmic reticulum-Golgi intermediate compartment
D0044177cellular_componenthost cell Golgi apparatus
D1990904cellular_componentribonucleoprotein complex
E0003723molecular_functionRNA binding
E0019013cellular_componentviral nucleocapsid
E0019028cellular_componentviral capsid
E0030430cellular_componenthost cell cytoplasm
E0042025cellular_componenthost cell nucleus
E0042802molecular_functionidentical protein binding
E0044172cellular_componenthost cell endoplasmic reticulum-Golgi intermediate compartment
E0044177cellular_componenthost cell Golgi apparatus
E1990904cellular_componentribonucleoprotein complex
F0003723molecular_functionRNA binding
F0019013cellular_componentviral nucleocapsid
F0019028cellular_componentviral capsid
F0030430cellular_componenthost cell cytoplasm
F0042025cellular_componenthost cell nucleus
F0042802molecular_functionidentical protein binding
F0044172cellular_componenthost cell endoplasmic reticulum-Golgi intermediate compartment
F0044177cellular_componenthost cell Golgi apparatus
F1990904cellular_componentribonucleoprotein complex
G0003723molecular_functionRNA binding
G0019013cellular_componentviral nucleocapsid
G0019028cellular_componentviral capsid
G0030430cellular_componenthost cell cytoplasm
G0042025cellular_componenthost cell nucleus
G0042802molecular_functionidentical protein binding
G0044172cellular_componenthost cell endoplasmic reticulum-Golgi intermediate compartment
G0044177cellular_componenthost cell Golgi apparatus
G1990904cellular_componentribonucleoprotein complex
H0003723molecular_functionRNA binding
H0019013cellular_componentviral nucleocapsid
H0019028cellular_componentviral capsid
H0030430cellular_componenthost cell cytoplasm
H0042025cellular_componenthost cell nucleus
H0042802molecular_functionidentical protein binding
H0044172cellular_componenthost cell endoplasmic reticulum-Golgi intermediate compartment
H0044177cellular_componenthost cell Golgi apparatus
H1990904cellular_componentribonucleoprotein complex
I0003723molecular_functionRNA binding
I0019013cellular_componentviral nucleocapsid
I0019028cellular_componentviral capsid
I0030430cellular_componenthost cell cytoplasm
I0042025cellular_componenthost cell nucleus
I0042802molecular_functionidentical protein binding
I0044172cellular_componenthost cell endoplasmic reticulum-Golgi intermediate compartment
I0044177cellular_componenthost cell Golgi apparatus
I1990904cellular_componentribonucleoprotein complex
J0003723molecular_functionRNA binding
J0019013cellular_componentviral nucleocapsid
J0019028cellular_componentviral capsid
J0030430cellular_componenthost cell cytoplasm
J0042025cellular_componenthost cell nucleus
J0042802molecular_functionidentical protein binding
J0044172cellular_componenthost cell endoplasmic reticulum-Golgi intermediate compartment
J0044177cellular_componenthost cell Golgi apparatus
J1990904cellular_componentribonucleoprotein complex
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues70
DetailsSITE: RNA-binding => ECO:0000269|PubMed:23129612
ChainResidueDetails
ATYR30
BASN66
BLYS67
BARG70
BARG99
BARG106
CTYR30
CPHE33
CASN66
CLYS67
CARG70
APHE33
CARG99
CARG106
DTYR30
DPHE33
DASN66
DLYS67
DARG70
DARG99
DARG106
ETYR30
AASN66
EPHE33
EASN66
ELYS67
EARG70
EARG99
EARG106
FTYR30
FPHE33
FASN66
FLYS67
ALYS67
FARG70
FARG99
FARG106
GTYR30
GPHE33
GASN66
GLYS67
GARG70
GARG99
GARG106
AARG70
HTYR30
HPHE33
HASN66
HLYS67
HARG70
HARG99
HARG106
ITYR30
IPHE33
IASN66
AARG99
ILYS67
IARG70
IARG99
IARG106
JTYR30
JPHE33
JASN66
JLYS67
JARG70
JARG99
AARG106
JARG106
BTYR30
BPHE33

site_idSWS_FT_FI2
Number of Residues10
DetailsSITE: Important for dimerization => ECO:0000269|PubMed:20547879
ChainResidueDetails
ATRP125
JTRP125
BTRP125
CTRP125
DTRP125
ETRP125
FTRP125
GTRP125
HTRP125
ITRP125

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PDB entries from 2024-08-14

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