4GRX
Structure of an omega-aminotransferase from Paracoccus denitrificans
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004015 | molecular_function | adenosylmethionine-8-amino-7-oxononanoate transaminase activity |
| A | 0009102 | biological_process | biotin biosynthetic process |
| A | 0009448 | biological_process | gamma-aminobutyric acid metabolic process |
| A | 0030170 | molecular_function | pyridoxal phosphate binding |
| B | 0004015 | molecular_function | adenosylmethionine-8-amino-7-oxononanoate transaminase activity |
| B | 0009102 | biological_process | biotin biosynthetic process |
| B | 0009448 | biological_process | gamma-aminobutyric acid metabolic process |
| B | 0030170 | molecular_function | pyridoxal phosphate binding |
| C | 0004015 | molecular_function | adenosylmethionine-8-amino-7-oxononanoate transaminase activity |
| C | 0009102 | biological_process | biotin biosynthetic process |
| C | 0009448 | biological_process | gamma-aminobutyric acid metabolic process |
| C | 0030170 | molecular_function | pyridoxal phosphate binding |
| D | 0004015 | molecular_function | adenosylmethionine-8-amino-7-oxononanoate transaminase activity |
| D | 0009102 | biological_process | biotin biosynthetic process |
| D | 0009448 | biological_process | gamma-aminobutyric acid metabolic process |
| D | 0030170 | molecular_function | pyridoxal phosphate binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE NA A 501 |
| Chain | Residue |
| A | VAL101 |
| A | GLU102 |
| A | SER104 |
| A | PHE106 |
| A | HOH674 |
| site_id | AC2 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE DAV A 502 |
| Chain | Residue |
| A | PHE19 |
| A | LLP285 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE NA B 501 |
| Chain | Residue |
| B | SER104 |
| B | PHE106 |
| B | HOH632 |
| B | HOH650 |
| B | VAL101 |
| B | GLU102 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE NA C 501 |
| Chain | Residue |
| C | VAL101 |
| C | GLU102 |
| C | SER104 |
| C | PHE106 |
| C | HOH661 |
| C | HOH664 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE DAV C 502 |
| Chain | Residue |
| C | PHE19 |
| C | TYR150 |
| C | TYR165 |
| C | LLP285 |
| site_id | AC6 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE NA D 501 |
| Chain | Residue |
| D | VAL101 |
| D | GLU102 |
| D | SER104 |
| D | PHE106 |
| D | HOH629 |
| D | HOH643 |
Functional Information from PROSITE/UniProt
| site_id | PS00600 |
| Number of Residues | 38 |
| Details | AA_TRANSFER_CLASS_3 Aminotransferases class-III pyridoxal-phosphate attachment site. MIsDEVic.GFgRtGntwgcltydfmp....DAIisSKnltAG |
| Chain | Residue | Details |
| A | MET253-GLY290 |
