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4GRX

Structure of an omega-aminotransferase from Paracoccus denitrificans

Functional Information from GO Data
ChainGOidnamespacecontents
A0003867molecular_function4-aminobutyrate transaminase activity
A0004015molecular_functionadenosylmethionine-8-amino-7-oxononanoate transaminase activity
A0008483molecular_functiontransaminase activity
A0009102biological_processbiotin biosynthetic process
A0009448biological_processgamma-aminobutyric acid metabolic process
A0030170molecular_functionpyridoxal phosphate binding
B0003867molecular_function4-aminobutyrate transaminase activity
B0004015molecular_functionadenosylmethionine-8-amino-7-oxononanoate transaminase activity
B0008483molecular_functiontransaminase activity
B0009102biological_processbiotin biosynthetic process
B0009448biological_processgamma-aminobutyric acid metabolic process
B0030170molecular_functionpyridoxal phosphate binding
C0003867molecular_function4-aminobutyrate transaminase activity
C0004015molecular_functionadenosylmethionine-8-amino-7-oxononanoate transaminase activity
C0008483molecular_functiontransaminase activity
C0009102biological_processbiotin biosynthetic process
C0009448biological_processgamma-aminobutyric acid metabolic process
C0030170molecular_functionpyridoxal phosphate binding
D0003867molecular_function4-aminobutyrate transaminase activity
D0004015molecular_functionadenosylmethionine-8-amino-7-oxononanoate transaminase activity
D0008483molecular_functiontransaminase activity
D0009102biological_processbiotin biosynthetic process
D0009448biological_processgamma-aminobutyric acid metabolic process
D0030170molecular_functionpyridoxal phosphate binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA A 501
ChainResidue
AVAL101
AGLU102
ASER104
APHE106
AHOH674

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE DAV A 502
ChainResidue
APHE19
ALLP285

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA B 501
ChainResidue
BSER104
BPHE106
BHOH632
BHOH650
BVAL101
BGLU102

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA C 501
ChainResidue
CVAL101
CGLU102
CSER104
CPHE106
CHOH661
CHOH664

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE DAV C 502
ChainResidue
CPHE19
CTYR150
CTYR165
CLLP285

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA D 501
ChainResidue
DVAL101
DGLU102
DSER104
DPHE106
DHOH629
DHOH643

Functional Information from PROSITE/UniProt
site_idPS00600
Number of Residues38
DetailsAA_TRANSFER_CLASS_3 Aminotransferases class-III pyridoxal-phosphate attachment site. MIsDEVic.GFgRtGntwgcltydfmp....DAIisSKnltAG
ChainResidueDetails
AMET253-GLY290

220113

PDB entries from 2024-05-22

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