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4GPF

Structure of the Fe3+-biliverdin-HmuO, heme oxygenase from Corynebacterium diphtheriae (data set III)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004392molecular_functionheme oxygenase (decyclizing) activity
A0006788biological_processheme oxidation
A0006979biological_processresponse to oxidative stress
A0016491molecular_functionoxidoreductase activity
A0020037molecular_functionheme binding
A0042167biological_processheme catabolic process
A0046872molecular_functionmetal ion binding
B0004392molecular_functionheme oxygenase (decyclizing) activity
B0006788biological_processheme oxidation
B0006979biological_processresponse to oxidative stress
B0016491molecular_functionoxidoreductase activity
B0020037molecular_functionheme binding
B0042167biological_processheme catabolic process
B0046872molecular_functionmetal ion binding
C0004392molecular_functionheme oxygenase (decyclizing) activity
C0006788biological_processheme oxidation
C0006979biological_processresponse to oxidative stress
C0016491molecular_functionoxidoreductase activity
C0020037molecular_functionheme binding
C0042167biological_processheme catabolic process
C0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues19
DetailsBINDING SITE FOR RESIDUE BLA A 901
ChainResidue
ALYS13
AARG177
APHE201
AASN204
APHE208
AFE902
ASO4905
AHOH1039
AHOH1062
AHOH1069
AHOH1070
AHIS20
AGLU24
AMET29
ALEU33
ATYR130
AVAL131
AGLY135
ASER138

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE FE A 902
ChainResidue
AHIS20
ABLA901

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 903
ChainResidue
AGLY67
AALA69
AGLU70
ASER71
AHOH1021
AHOH1036

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 904
ChainResidue
ASER26
ATHR27
AHIS205
AHOH1038

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 905
ChainResidue
ALYS173
AARG177
ABLA901

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 601
ChainResidue
BSER326
BTHR327
BHIS505
BHOH785

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 602
ChainResidue
BLYS470
BLYS473
BARG477
BHOH792

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 B 603
ChainResidue
BGLY367
BALA369
BGLU370
BSER371
BHOH747
BHOH761
BHOH787

site_idAC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 B 604
ChainResidue
BARG385
BHOH706

site_idBC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE SO4 B 605
ChainResidue
BARG399

site_idBC2
Number of Residues16
DetailsBINDING SITE FOR RESIDUE BLA B 606
ChainResidue
BLYS313
BHIS320
BGLU324
BMET329
BLEU333
BTYR430
BVAL431
BGLY435
BSER438
BGLY439
BILE443
BARG477
BPHE501
BPHE508
BHOH726
BHOH814

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 C 901
ChainResidue
CSER626
CTHR627
CHIS805
CHOH1129

site_idBC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 C 902
ChainResidue
CGLY638
CVAL639
CALA640

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 C 903
ChainResidue
CALA669
CGLU670
CSER671
CHOH1021
CHOH1069
CHOH1075

site_idBC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 C 904
ChainResidue
CVAL682
CARG685
CHOH1018
CHOH1026

site_idBC7
Number of Residues17
DetailsBINDING SITE FOR RESIDUE BLA C 905
ChainResidue
CHOH1066
CHOH1105
CHOH1106
CLYS613
CHIS620
CALA623
CGLU624
CTYR730
CVAL731
CGLY735
CSER738
CILE743
CARG777
CPHE808
CHOH1023
CHOH1029
CHOH1057

Functional Information from PROSITE/UniProt
site_idPS00593
Number of Residues11
DetailsHEME_OXYGENASE Heme oxygenase signature. LVAHHYVRYLG
ChainResidueDetails
ALEU125-GLY135

226707

PDB entries from 2024-10-30

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