4GME

Crystal structure of mannonate dehydratase (target EFI-502209) from caulobacter crescentus cb15 complexed with magnesium and d-mannonate

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000287	molecular_function	magnesium ion binding
A	0008927	molecular_function	mannonate dehydratase activity
A	0009063	biological_process	amino acid catabolic process
A	0016052	biological_process	carbohydrate catabolic process
A	0016829	molecular_function	lyase activity
A	0046872	molecular_function	metal ion binding
C	0000287	molecular_function	magnesium ion binding
C	0008927	molecular_function	mannonate dehydratase activity
C	0009063	biological_process	amino acid catabolic process
C	0016052	biological_process	carbohydrate catabolic process
C	0016829	molecular_function	lyase activity
C	0046872	molecular_function	metal ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 501

Chain	Residue
A	ASP234
A	GLU260
A	GLU286
A	ARG307
A	CO3504
A	HOH601

---

site_id	AC2
Number of Residues	6
Details	BINDING SITE FOR RESIDUE CL A 502

Chain	Residue
A	ALA106
C	VAL105
C	CL502
A	GLY102
A	GLY103
A	VAL105

---

site_id	AC3
Number of Residues	11
Details	BINDING SITE FOR RESIDUE GOL A 503

Chain	Residue
A	ASN61
A	HIS236
A	GLU286
A	HIS336
A	ALA338
A	ASP340
A	TRP426
A	CO3504
A	HOH845
C	TYR99
C	TRP100

---

site_id	AC4
Number of Residues	11
Details	BINDING SITE FOR RESIDUE CO3 A 504

Chain	Residue
A	ARG171
A	TYR183
A	ASP234
A	GLU260
A	GLU286
A	ARG307
A	GLU363
A	MG501
A	GOL503
A	HOH602
A	HOH845

---

site_id	AC5
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG C 501

Chain	Residue
C	ASP234
C	GLU260
C	GLU286
C	ARG307
C	CS2503
C	HOH601

---

site_id	AC6
Number of Residues	7
Details	BINDING SITE FOR RESIDUE CL C 502

Chain	Residue
A	PRO104
A	VAL105
A	CL502
C	GLY102
C	GLY103
C	VAL105
C	ALA106

---

site_id	AC7
Number of Residues	20
Details	BINDING SITE FOR RESIDUE CS2 C 503

Chain	Residue
A	TYR99
A	TRP100
C	ASN61
C	ARG171
C	TYR183
C	ASP234
C	HIS236
C	GLU260
C	GLU286
C	ARG307
C	HIS336
C	ALA338
C	ASP340
C	GLU363
C	LEU413
C	TRP426
C	MG501
C	HOH602
C	HOH605
C	HOH606

---

Functional Information from PROSITE/UniProt

site_id	PS00908
Number of Residues	26
Details	MR_MLE_1 Mandelate racemase / muconate lactonizing enzyme family signature 1. AlAAVDmALwDIkGKvaglPVyqLLG

Chain	Residue	Details
A	ALA109-GLY134

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	4
Details	Active site: {"description":"Proton donor/acceptor","evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	12
Details	Binding site: {}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	2
Details	Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	4
Details	Binding site: {"evidences":[{"source":"PubMed","id":"24697546","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	2
Details	Site: {"description":"Important for activity and substrate specificity; Ala is observed in family members with high D-mannonate dehydratase activity that have no activity with D-gluconate","evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---