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4GKB

Crystal structure of a short chain dehydrogenase homolog (target efi-505321) from burkholderia multivorans, unliganded structure

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0004316molecular_function3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
A0006004biological_processfucose metabolic process
A0016491molecular_functionoxidoreductase activity
A0019317biological_processfucose catabolic process
B0000166molecular_functionnucleotide binding
B0004316molecular_function3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
B0006004biological_processfucose metabolic process
B0016491molecular_functionoxidoreductase activity
B0019317biological_processfucose catabolic process
C0000166molecular_functionnucleotide binding
C0004316molecular_function3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
C0006004biological_processfucose metabolic process
C0016491molecular_functionoxidoreductase activity
C0019317biological_processfucose catabolic process
D0000166molecular_functionnucleotide binding
D0004316molecular_function3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
D0006004biological_processfucose metabolic process
D0016491molecular_functionoxidoreductase activity
D0019317biological_processfucose catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 301
ChainResidue
AARG39

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 302
ChainResidue
APRO234
ASER237
AHOH436
AHOH614
BHOH467
BHOH478

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 303
ChainResidue
AHOH421
DHOH604
ALEU99
AASN149

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CA B 301
ChainResidue
AHOH610
BGLU199
BPRO234
BSER237
BHOH439
BHOH679
BHOH681

site_idAC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO B 302
ChainResidue
BTHR251
BHIS252
BLEU253
BHOH413
DVAL144
DTHR145
DTHR251
DHOH450

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 303
ChainResidue
BASP7
BARG56
BPHE81
BARG83

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CA C 301
ChainResidue
CGLU199
CPRO234
CSER237
CHOH437
CHOH456
DHOH414
DHOH458

site_idAC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL C 302
ChainResidue
CARG39

site_idAC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL C 303
ChainResidue
CGLN65
CASP67

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL D 301
ChainResidue
AHOH586
DLEU99
DASN149
DHOH420
DHOH540

site_idBC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL D 302
ChainResidue
DARG39

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO D 303
ChainResidue
DTRP243
DPHE245
DHIS252
DHOH450

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: Proton acceptor => ECO:0000250|UniProtKB:A7IQH5
ChainResidueDetails
ATYR153
BTYR153
CTYR153
DTYR153

site_idSWS_FT_FI2
Number of Residues68
DetailsBINDING: BINDING => ECO:0000269|PubMed:23214453, ECO:0007744|PDB:4GVX
ChainResidueDetails
ASER17
AILE19
AARG39
AHIS40
AGLU63
ALEU64
AASN90
AASN94
ASER140
ALYS141
AGLN147
ATYR153
ALYS157
AALA184
AGLU185
AVAL186
ATHR188
BSER17
BILE19
BARG39
BHIS40
BGLU63
BLEU64
BASN90
BASN94
BSER140
BLYS141
BGLN147
BTYR153
BLYS157
BALA184
BGLU185
BVAL186
BTHR188
CSER17
CILE19
CARG39
CHIS40
CGLU63
CLEU64
CASN90
CASN94
CSER140
CLYS141
CGLN147
CTYR153
CLYS157
CALA184
CGLU185
CVAL186
CTHR188
DSER17
DILE19
DARG39
DHIS40
DGLU63
DLEU64
DASN90
DASN94
DSER140
DLYS141
DGLN147
DTYR153
DLYS157
DALA184
DGLU185
DVAL186
DTHR188

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PDB entries from 2024-06-12

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