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4GC6

Crystal structure of Dpo4 in complex with N-MC-dAMP opposite dT

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0003677molecular_functionDNA binding
A0003684molecular_functiondamaged DNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005737cellular_componentcytoplasm
A0006260biological_processDNA replication
A0006261biological_processDNA-templated DNA replication
A0006281biological_processDNA repair
A0006974biological_processDNA damage response
A0016740molecular_functiontransferase activity
A0016779molecular_functionnucleotidyltransferase activity
A0034061molecular_functionDNA polymerase activity
A0042276biological_processerror-prone translesion synthesis
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues14
DetailsBINDING SITE FOR RESIDUE 0OH A 401
ChainResidue
ATYR10
AHOH526
AHOH531
PDC14
TDT4
TDG5
APHE11
ATYR12
AALA44
ATHR45
AARG51
AASP105
ACA402
ACA403

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A 402
ChainResidue
AASP7
APHE8
AASP105
A0OH401

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A 403
ChainResidue
AASP7
AGLU106
A0OH401
PDC14

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA A 404
ChainResidue
AALA181
AILE186
AHOH512
AHOH513
PDC13

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A 405
ChainResidue
AASP294
AHOH529
AHOH530
PDA10

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues184
DetailsDomain: {"description":"UmuC"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsActive site: {}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsSite: {"description":"Substrate discrimination"}
ChainResidueDetails

247536

PDB entries from 2026-01-14

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