4G7S

Structure of Recombinant Cytochrome ba3 Oxidase mutant V236I from Thermus thermophilus

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0004129	molecular_function	cytochrome-c oxidase activity
A	0005886	cellular_component	plasma membrane
A	0006119	biological_process	oxidative phosphorylation
A	0006811	biological_process	monoatomic ion transport
A	0009060	biological_process	aerobic respiration
A	0016020	cellular_component	membrane
A	0020037	molecular_function	heme binding
A	0046872	molecular_function	metal ion binding
A	1902600	biological_process	proton transmembrane transport
B	0004129	molecular_function	cytochrome-c oxidase activity
B	0005507	molecular_function	copper ion binding
B	0005886	cellular_component	plasma membrane
B	0016020	cellular_component	membrane
B	0046872	molecular_function	metal ion binding
B	1902600	biological_process	proton transmembrane transport
C	0004129	molecular_function	cytochrome-c oxidase activity
C	0005886	cellular_component	plasma membrane
C	0006811	biological_process	monoatomic ion transport
C	0016020	cellular_component	membrane
C	1902600	biological_process	proton transmembrane transport

Functional Information from PDB Data

site_id	AC1
Number of Residues	4
Details	BINDING SITE FOR RESIDUE CU A 601

Chain	Residue
A	HIS233
A	HIS282
A	HIS283
A	PER604

---

site_id	AC2
Number of Residues	26
Details	BINDING SITE FOR RESIDUE HEM A 602

Chain	Residue
A	TYR65
A	LEU69
A	HIS72
A	ASN76
A	ALA77
A	LEU132
A	TYR133
A	PHE385
A	HIS386
A	VAL389
A	ALA390
A	THR394
A	MET432
A	MET435
A	ARG449
A	ARG450
A	ALA451
A	LEU477
A	HOH731
A	HOH739
A	HOH742
A	LEU32
A	GLY39
A	GLN42
A	ALA43
A	TYR46

---

site_id	AC3
Number of Residues	32
Details	BINDING SITE FOR RESIDUE HAS A 603

Chain	Residue
A	TYR133
A	TRP229
A	ILE236
A	TYR237
A	HIS282
A	HIS283
A	THR302
A	SER309
A	LEU310
A	ALA313
A	ALA317
A	LEU320
A	VAL350
A	LEU353
A	LEU354
A	PHE356
A	GLY360
A	GLY363
A	ASN366
A	ALA367
A	ASP372
A	HIS376
A	VAL381
A	HIS384
A	PHE385
A	GLN388
A	ARG449
A	PER604
A	HOH701
A	HOH744
A	HOH800
A	HOH801

---

site_id	AC4
Number of Residues	5
Details	BINDING SITE FOR RESIDUE PER A 604

Chain	Residue
A	HIS233
A	ILE236
A	HIS283
A	CU601
A	HAS603

---

site_id	AC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE OLC A 605

Chain	Residue
A	TYR161
A	ILE475
A	OLC611

---

site_id	AC6
Number of Residues	11
Details	BINDING SITE FOR RESIDUE OLC A 606

Chain	Residue
A	ILE115
A	PHE213
A	LEU215
A	TRP341
A	VAL347
A	TRP426
A	LEU430
A	OLC607
A	OLC610
A	OLC611
A	OLC612

---

site_id	AC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE OLC A 607

Chain	Residue
A	TRP143
A	PHE213
A	OLC606

---

site_id	AC8
Number of Residues	2
Details	BINDING SITE FOR RESIDUE OLC A 608

Chain	Residue
A	TRP111
A	OLC610

---

site_id	AC9
Number of Residues	4
Details	BINDING SITE FOR RESIDUE OLC A 609

Chain	Residue
A	LEU164
A	TRP167
A	ARG168
A	GLY528

---

site_id	BC1
Number of Residues	8
Details	BINDING SITE FOR RESIDUE OLC A 610

Chain	Residue
A	GLY104
A	LEU108
A	VAL468
A	PHE469
A	OLC606
A	OLC608
A	OLC611
A	OLC613

---

site_id	BC2
Number of Residues	15
Details	BINDING SITE FOR RESIDUE OLC A 611

Chain	Residue
A	GLY104
A	LEU105
A	LEU108
A	MET112
A	VAL151
A	LEU209
A	VAL471
A	LEU472
A	OLC605
A	OLC606
A	OLC610
A	OLC612
A	HOH711
A	HOH769
A	ASN102

---

site_id	BC3
Number of Residues	5
Details	BINDING SITE FOR RESIDUE OLC A 612

Chain	Residue
A	ALA416
A	ARG419
A	OLC606
A	OLC611
A	HOH703

---

site_id	BC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE OLC A 613

Chain	Residue
A	ARG337
A	TRP341
A	LEU430
A	OLC610

---

site_id	BC5
Number of Residues	6
Details	BINDING SITE FOR RESIDUE CUA B 201

Chain	Residue
B	HIS114
B	CYS149
B	GLN151
B	CYS153
B	HIS157
B	MET160

---

site_id	BC6
Number of Residues	6
Details	BINDING SITE FOR RESIDUE OLC B 202

Chain	Residue
B	GLY17
B	PHE21
B	VAL28
B	LEU32
B	TYR35
C	TYR27

---

site_id	BC7
Number of Residues	5
Details	BINDING SITE FOR RESIDUE OLC B 203

Chain	Residue
B	ARG141
B	GLU144
B	TYR145
C	ARG33
C	OLC101

---

site_id	BC8
Number of Residues	7
Details	BINDING SITE FOR RESIDUE OLC B 204

Chain	Residue
B	ALA13
B	TYR14
B	GLY17
B	TRP18
B	PHE21
B	TYR35
C	ILE12

---

site_id	BC9
Number of Residues	4
Details	BINDING SITE FOR RESIDUE OLC B 205

Chain	Residue
A	PRO292
A	VAL300
B	ALA42
B	HOH305

---

site_id	CC1
Number of Residues	5
Details	BINDING SITE FOR RESIDUE OLC C 101

Chain	Residue
A	PRO358
A	HIS440
B	OLC203
C	VAL29
C	ALA32

---

site_id	CC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE OLC C 102

Chain	Residue
C	VAL14
C	THR18

---

Functional Information from PROSITE/UniProt

site_id	PS00078
Number of Residues	49
Details	COX2 CO II and nitrous oxide reductase dinuclear copper centers signature. ViHgfhvegtninvevlpgevstvrytfkrpgeyrii......CnqyCglgHqnM

Chain	Residue	Details
B	VAL112-MET160

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	260
Details	Transmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	3
Details	Binding site: {"description":"axial binding residue","evidences":[{"evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	6
Details	Binding site: {}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	2
Details	Binding site: {"evidences":[{"evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	2
Details	Cross-link: {"description":"1'-histidyl-3'-tyrosine (His-Tyr)"}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	64
Details	Transmembrane: {"description":"Helical"}

Chain

Residue

Details

---

site_id	SWS_FT_FI7
Number of Residues	129
Details	Topological domain: {"description":"Periplasmic"}

Chain

Residue

Details

---

Catalytic Information from CSA

site_id	MCSA1
Number of Residues	2
Details	M-CSA 735

Chain	Residue	Details
B	PHE86	electron shuttle
B	PHE88	electron shuttle
A	HIS384	electron shuttle
A	PHE385	electron shuttle
A	HIS386	electron shuttle
A	ARG449	electron shuttle
A	ARG450	electron shuttle

---