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4G7E

Crystal structure of pigeon pea urease

Functional Information from GO Data
ChainGOidnamespacecontents
A0006807biological_processobsolete nitrogen compound metabolic process
A0009039molecular_functionurease activity
A0016151molecular_functionnickel cation binding
A0016787molecular_functionhydrolase activity
A0016810molecular_functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
A0035550cellular_componenturease complex
A0043419biological_processurea catabolic process
B0006807biological_processobsolete nitrogen compound metabolic process
B0009039molecular_functionurease activity
B0016151molecular_functionnickel cation binding
B0016787molecular_functionhydrolase activity
B0016810molecular_functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
B0035550cellular_componenturease complex
B0043419biological_processurea catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE NI A 901
ChainResidue
AKCX490
AHIS492
AHIS519
AHIS545
AGLY550
ANI902
AHOH1001
AHOH1003

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE NI A 902
ChainResidue
AHIS409
AKCX490
AASP633
ANI901
AHOH1002
AHOH1003
AHIS407

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NI B 901
ChainResidue
BHIS407
BHIS409
BKCX490
BASP633
BHOH1001
BHOH1002

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NI B 902
ChainResidue
BKCX490
BHIS519
BHIS545
BGLY550
BHOH1001
BHOH1004

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 903
ChainResidue
BARG29
BARG67
BPRO72
BASN127
BASP128

Functional Information from PROSITE/UniProt
site_idPS00145
Number of Residues17
DetailsUREASE_2 Urease active site. MVCHHLdanIaeDVaFS
ChainResidueDetails
AMET590-SER606
BMET590-SER606

site_idPS00430
Number of Residues86
DetailsTONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. mklspreieklglhnagylaqkrlarglrlnyteavaliatqimefvrdgdktvaqlmsigrellgrrqvlpavpklv.....................................ESVQVEAT
ChainResidueDetails
AMET1-THR86
BMET1-THR86

site_idPS01120
Number of Residues14
DetailsUREASE_1 Urease nickel ligands signature. TAGAIDcHVHyicP
ChainResidueDetails
ATHR400-PRO413
BTHR400-PRO413

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PDB entries from 2024-06-12

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